RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 PRSS38A1L453 326 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 PYGLP06737 847 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 NOP2P46087 812 aaKnown RBP16.82■□□□□ 0.28
CLK3-210ENST00000563112 GPR1P46091 355 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 GABREP78334 506 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 DPTQ07507 201 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 PPIDQ08752 370 aaKnown RBP16.82■□□□□ 0.28
CLK3-210ENST00000563112 AP1B1Q10567 949 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 SPIDRQ14159 915 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 LRRC66Q68CR7 880 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 SLC9A4Q6AI14 798 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 TECPR1Q7Z6L1 1165 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 PELI3Q8N2H9 469 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 PLD5Q8N7P1 536 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 KYQ8NBH2 561 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 RNF25Q96BH1 459 aaPredicted RBP16.82■□□□□ 0.28
CLK3-210ENST00000563112 AP2M1Q96CW1 435 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 LGMNQ99538 433 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 TMEM168Q9H0V1 697 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 POLR1BQ9H9Y6 1135 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 CARS2Q9HA77 564 aaKnown RBP16.82■□□□□ 0.28
CLK3-210ENST00000563112 PCDH9Q9HC56 1237 aa16.82■□□□□ 0.28
CLK3-210ENST00000563112 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
CLK3-210ENST00000563112 CAPN8A6NHC0 703 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 KCNK1O00180 336 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 PPP1R12AO14974 1030 aaPredicted RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 TLX3O43711 291 aaPredicted RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 MPOP05164 745 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 EIF2S3P41091 472 aaKnown RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 ABCG1P45844 678 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 LSSP48449 732 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 IFI35P80217 286 aaPredicted RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 CDK3Q00526 305 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 NIPAL4Q0D2K0 466 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 ILF3Q12906 894 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLK3-210ENST00000563112 PTPRRQ15256 657 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 SPA17Q15506 151 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 TBC1D25Q3MII6 688 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 KCTD16Q68DU8 428 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 OGFOD3Q6PK18 319 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 BZW1Q7L1Q6 419 aaKnown RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 NLRP8Q86W28 1048 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 LPCAT1Q8NF37 534 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 SNIP1Q8TAD8 396 aaKnown RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 CCDC74AQ96AQ1 378 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 ZNF578Q96N58 590 aaPredicted RBP16.81■□□□□ 0.28
CLK3-210ENST00000563112 GSDMCQ9BYG8 508 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 BRD8Q9H0E9 1235 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 ABCG8Q9H221 673 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 DPEP2Q9H4A9 486 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 CD84Q9UIB8 345 aa16.81■□□□□ 0.28
CLK3-210ENST00000563112 C3orf70A6NLC5 250 aaPredicted RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 TMX2-CTNND1H3BSU7 103 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 CEACAM5P06731 702 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 COMTP21964 271 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 CD86P42081 329 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 DYNLT1P63172 113 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 PTSQ03393 145 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 PEX6Q13608 980 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 TFDP2Q14188 446 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 ZNF765Q7L2R6 523 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 PDZD3Q86UT5 571 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 RAVER1Q8IY67 606 aaKnown RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 NRSN1Q8IZ57 195 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 TC2NQ8N9U0 490 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 GPR156Q8NFN8 814 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 KIAA1524Q8TCG1 905 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 GFM1Q96RP9 751 aaKnown RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 MLPHQ9BV36 600 aaPredicted RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 ADGRE3Q9BY15 652 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 FRMD8Q9BZ67 464 aaPredicted RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 SUDS3Q9H7L9 328 aaPredicted RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
CLK3-210ENST00000563112 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 LAMA5O15230 3695 aa16.8■□□□□ 0.28
CLK3-210ENST00000563112 A0A0U1RQS6 177 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 B4DGG1 531 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 PSTPIP1O43586 416 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 PRLP01236 227 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 GLB1P16278 677 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 RBMS1P29558 406 aaKnown RBP16.79■□□□□ 0.28
CLK3-210ENST00000563112 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
CLK3-210ENST00000563112 GNPDA1P46926 289 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 STC1P52823 247 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 HADHBP55084 474 aaKnown RBP16.79■□□□□ 0.28
CLK3-210ENST00000563112 IHHQ14623 411 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 C14orf28Q4W4Y0 310 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 C3orf38Q5JPI3 329 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 ADAMTSL4Q6UY14 1074 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 CCHCR1Q8TD31 782 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 GPBAR1Q8TDU6 330 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 ATXN7L3BQ96GX2 97 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 SMIM14Q96QK8 99 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 LYSMD1Q96S90 227 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 SEPT10Q9P0V9 454 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 SLC17A4Q9Y2C5 497 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 ENTPD2Q9Y5L3 495 aa16.79■□□□□ 0.28
CLK3-210ENST00000563112 ALG6Q9Y672 507 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms