RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MAGEE2Q8TD90 523 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ATXN7L3BQ96GX2 97 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC39A3Q9BRY0 314 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 MAGEB5Q9BZ81 275 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ABCB10Q9NRK6 738 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SMPD3Q9NY59 655 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 USP18Q9UMW8 372 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 WDR27A2RRH5 827 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 KPNA7A9QM74 516 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 CCNKO75909 580 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 RASAL1O95294 804 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 HMGCRP04035 888 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 HTR1BP28222 390 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SOX4Q06945 474 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 INCA1Q0VD86 236 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 TFAP2DQ7Z6R9 452 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 CDKL2Q92772 493 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC7A5P2Q9GIP4 190 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 IRF2BPLQ9H1B7 796 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 AGPAT4Q9NRZ5 378 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 CCM2LQ9NUG4 571 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 CACNA2D2Q9NY47 1150 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 CD300AQ9UGN4 299 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SYCE1LA8MT33 242 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 MAN1A2O60476 641 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 TMCC2O75069 709 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 UGT2B11O75310 529 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 KCNK2O95069 426 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 FASP25445 335 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 MAGEA3P43357 314 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 PSEN2P49810 448 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 PDK2Q15119 407 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 AASDHQ4L235 1098 aaPredicted RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ARL13AQ5H913 290 aaPredicted RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 SNAP47Q5SQN1 464 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 MCRS1Q96EZ8 462 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ZFP42Q96MM3 310 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 SP140LQ9H930 580 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 SNX15Q9NRS6 342 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ZDHHC2Q9UIJ5 367 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 MKI67P46013 3256 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 SMIM28A0A1B0GU29 152 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ABCB7O75027 752 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 TOMM70O94826 608 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ATXN1P54253 815 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 NIPAL4Q0D2K0 466 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 LINC00523Q86TU6 105 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 DDIASQ8IXT1 998 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 CMTR2Q8IYT2 770 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 LGI2Q8N0V4 545 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 BEND7Q8N7W2 519 aaPredicted RBP14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 MAGED4Q96JG8 741 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 ADNPQ9H2P0 1102 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 SLCO3A1Q9UIG8 710 aa14.03□□□□□ -0.16
GTF3C1-203ENST00000562609 DHRS12A0PJE2 317 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 ACOX3O15254 700 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 GSNP06396 782 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 CTGFP29279 349 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 CD40LGP29965 261 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 AFF1P51825 1210 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 CDH6P55285 790 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 MRPS15P82914 257 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 STX5Q13190 355 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC12A1Q13621 1099 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 DCAF4L1Q3SXM0 396 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 CDONQ4KMG0 1287 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 SAMD4BQ5PRF9 694 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 C9orf57Q5W0N0 161 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 REP15Q6BDI9 236 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 ZCCHC8Q6NZY4 707 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 NEK5Q6P3R8 708 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 MCUQ8NE86 351 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 CENPNQ96H22 339 aaPredicted RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 MUS81Q96NY9 551 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 ZIC5Q96T25 663 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 ING2Q9H160 280 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 RSAD1Q9HA92 442 aa14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 PIH1D1Q9NWS0 290 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-203ENST00000562609 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 MBLAC1A4D2B0 266 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 RAD51BO15315 384 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 METTL18O95568 372 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 CTSHP09668 335 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 IL10P22301 178 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 RPS9P46781 194 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 SEPHS1P49903 392 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 ZNF135P52742 658 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 RABGGTBP53611 331 aa14.02□□□□□ -0.17
GTF3C1-203ENST00000562609 ARHGEF6Q15052 776 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms