RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 PIM3Q86V86 326 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 CELF5Q8N6W0 485 aaKnown RBP16.54■□□□□ 0.24
PKD1-225ENST00000562297 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.54■□□□□ 0.24
PKD1-225ENST00000562297 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
PKD1-225ENST00000562297 TTC8Q8TAM2 541 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 ERP27Q96DN0 273 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 TCF12Q99081 682 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
PKD1-225ENST00000562297 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 GPAMQ9HCL2 828 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 BPIFA1Q9NP55 256 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 KCNK4Q9NYG8 393 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 MARCOQ9UEW3 520 aaPredicted RBP16.54■□□□□ 0.24
PKD1-225ENST00000562297 SLCO3A1Q9UIG8 710 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 DOCK8Q8NF50 2099 aa16.54■□□□□ 0.24
PKD1-225ENST00000562297 KIF26AQ9ULI4 1882 aaPredicted RBP16.54■□□□□ 0.24
PKD1-225ENST00000562297 ABCE1P61221 599 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 SNRPD1P62314 119 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 ECT2LQ008S8 904 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 CSHL1Q14406 222 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 DMC1Q14565 340 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MYLK3Q32MK0 819 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 PSAPL1Q6NUJ1 521 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 CCDC91Q7Z6B0 441 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 SKA1Q96BD8 255 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 ECHDC3Q96DC8 303 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MRPL57Q9BQC6 102 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MRPL46Q9H2W6 279 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 FBXO10Q9UK96 956 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MED16Q9Y2X0 877 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 EPOPA6NHQ4 379 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 SLC9A3R1O14745 358 aaPredicted RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 CCDC166P0CW27 439 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 PMLP29590 882 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MC4RP32245 332 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 SLC26A3P40879 764 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 SETDB1Q15047 1291 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 TECRLQ5HYJ1 363 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 LIPMQ5VYY2 423 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 PIWIL2Q8TC59 973 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 SCYL1Q96KG9 808 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 AARSD1Q9BTE6 412 aaKnown RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 SLC2A11Q9BYW1 496 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 HECAQ9UBI9 543 aaPredicted RBP16.53■□□□□ 0.24
PKD1-225ENST00000562297 SLC25A13Q9UJS0 675 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 DNAJC16Q9Y2G8 782 aa16.53■□□□□ 0.24
PKD1-225ENST00000562297 DLX3O60479 287 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 LTA4HP09960 611 aaKnown RBP16.52■□□□□ 0.24
PKD1-225ENST00000562297 KITP10721 976 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 SERPINA4P29622 427 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 SULT2A1Q06520 285 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 DHCR24Q15392 516 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 FAM83EQ2M2I3 478 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 NPAS3Q8IXF0 933 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 PCDH20Q8N6Y1 951 aaKnown RBP16.52■□□□□ 0.24
PKD1-225ENST00000562297 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 MYLIPQ8WY64 445 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 TUBGCP5Q96RT8 1024 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 C19orf43Q9BQ61 176 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 GPR63Q9BZJ6 419 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 LMAN2LQ9H0V9 348 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 SFXN1Q9H9B4 322 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 POPDC3Q9HBV1 291 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 HEY2Q9UBP5 337 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 PIKFYVEQ9Y2I7 2098 aa16.52■□□□□ 0.24
PKD1-225ENST00000562297 SPTBN5Q9NRC6 3674 aaKnown RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 CAPN8A6NHC0 703 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 TMEM114B3SHH9 223 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 H2AFYO75367 372 aaKnown RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 CYP17A1P05093 508 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 HNF1BP35680 557 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 VIPR2P41587 438 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 CCNHP51946 323 aaPredicted RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 AQP5P55064 265 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 NCALDP61601 193 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 GEN1Q17RS7 908 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 CTC1Q2NKJ3 1217 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 SETMARQ53H47 684 aaPredicted RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 SPDYAQ5MJ70 313 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 AGAP9Q5VTM2 703 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 DPY19L3Q6ZPD9 716 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 CLNKQ7Z7G1 428 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 NAT16Q8N8M0 369 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 MOCOSQ96EN8 888 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 ASIC4Q96FT7 647 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 BIRC8Q96P09 236 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 LYSMD1Q96S90 227 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 CPEB1Q9BZB8 566 aaKnown RBP16.52■□□□□ 0.23
PKD1-225ENST00000562297 NKX2-4Q9H2Z4 354 aa16.52■□□□□ 0.23
PKD1-225ENST00000562297 ZNF195O14628 629 aa16.51■□□□□ 0.23
PKD1-225ENST00000562297 SERPINB3P29508 390 aa16.51■□□□□ 0.23
PKD1-225ENST00000562297 KPNA2P52292 529 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms