RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 CRYL1Q9Y2S2 319 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 PFDN6O15212 129 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ITM2AO43736 263 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ALPIP09923 528 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 CTPS1P17812 591 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 CD9P21926 228 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 FSHRP23945 695 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 TTPAP49638 278 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
SNX1-211ENST00000560829 ARFIP2P53365 341 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
SNX1-211ENST00000560829 ABCE1P61221 599 aaKnown RBP12.89□□□□□ -0.35
SNX1-211ENST00000560829 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNX1-211ENST00000560829 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
SNX1-211ENST00000560829 FAM78AQ5JUQ0 283 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 BPIFB1Q8TDL5 484 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 WFIKKN2Q8TEU8 576 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 SMARCD2Q92925 531 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 MRGPRX3Q96LB0 322 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
SNX1-211ENST00000560829 GDF15Q99988 308 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 GPR63Q9BZJ6 419 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 GDE1Q9NZC3 331 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 SLCO3A1Q9UIG8 710 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 DCTN4Q9UJW0 460 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
SNX1-211ENST00000560829 DNAJC6O75061 913 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 UBOX5O94941 541 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 ADH1CP00326 375 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 ADH5P11766 374 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 POLR2EP19388 210 aaKnown RBP12.88□□□□□ -0.35
SNX1-211ENST00000560829 HNF1BP35680 557 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 VIPR2P41587 438 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 GLRBP48167 497 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 RAD51Q06609 339 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 BNIP1Q12981 228 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 SETDB1Q15047 1291 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 ACAP2Q15057 778 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 GEN1Q17RS7 908 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 TECRLQ5HYJ1 363 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 PSAPL1Q6NUJ1 521 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 TMEM207Q6UWW9 146 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 DPY19L3Q6ZPD9 716 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 PIANPQ8IYJ0 282 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 CBARPQ8N350 705 aaPredicted RBP12.88□□□□□ -0.35
SNX1-211ENST00000560829 RYBPQ8N488 228 aaPredicted RBP12.88□□□□□ -0.35
SNX1-211ENST00000560829 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
SNX1-211ENST00000560829 GRIN3AQ8TCU5 1115 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 FRS2Q8WU20 508 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 FGF13Q92913 245 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
SNX1-211ENST00000560829 SCYL1Q96KG9 808 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 LRRC37BQ96QE4 947 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 SORT1Q99523 831 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
SNX1-211ENST00000560829 A0A0G2JND7 137 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 NDUFS3O75489 264 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 FSBPO95073 299 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 SLC4A1P02730 911 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ASLP04424 464 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 RBP1P09455 135 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 CCDC166P0CW27 439 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ARRB2P32121 409 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 SCTRP47872 440 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 DGKGP49619 791 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 CACNG1Q06432 222 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ACTN3Q08043 901 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 CSHL1Q14406 222 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 KLC3Q6P597 504 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ATG14Q6ZNE5 492 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ETFBKMTQ8IXQ9 262 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 OR2A12Q8NGT7 310 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ANKRD49Q8WVL7 239 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 SCRN2Q96FV2 425 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 MED16Q9Y2X0 877 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 MYO1CO00159 1063 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 TRIM24O15164 1050 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 DLX3O60479 287 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 LYPLA1O75608 230 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 NFATC1O95644 943 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ATP5BP06576 529 aaKnown RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 SRPRAP08240 638 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms