RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 DENND2CQ68D51 928 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 TCTN3Q6NUS6 607 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 ASB18Q6ZVZ8 466 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 NOP9Q86U38 636 aaKnown RBP17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 UMODL1-AS1Q8N2C9 162 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 PYROXD2Q8N2H3 581 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 ESX1Q8N693 406 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 BMPERQ8N8U9 685 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 JOSD2Q8TAC2 188 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 SSC4DQ8WTU2 575 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 CINPQ9BW66 212 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 FBXO8Q9NRD0 319 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 DACH1Q9UI36 760 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 TTLL8A6PVC2 850 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 WASH4PA8MWX3 477 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 J3KR12 359 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 FGF10O15520 208 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 KRT3P12035 628 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 NFKBIAP25963 317 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 ADCY8P40145 1251 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 UQCRFS1P47985 274 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 CDK3Q00526 305 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 MAN2A1Q16706 1144 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 TIPARPQ7Z3E1 657 aaKnown RBP17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 PELI3Q8N2H9 469 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 MLKLQ8NB16 471 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 ECHDC3Q96DC8 303 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 C11orf70Q9BRQ4 267 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 SELENOOQ9BVL4 669 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 TEX101Q9BY14 249 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 FRMD8Q9BZ67 464 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 TMEM184BQ9Y519 407 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 FHOD1Q9Y613 1164 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 KCNMB2Q9Y691 235 aa17.78■□□□□ 0.44
TSPAN3-208ENST00000560514 ARHGAP42A6NI28 874 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 POLR1CO15160 346 aaPredicted RBP17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 PRAMEF11O60813 436 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 GM2AP17900 193 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 GPD1P21695 349 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 GNLYP22749 145 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 RAET1GQ6H3X3 334 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 DOK6Q6PKX4 331 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 ZNF761Q86XN6 746 aaPredicted RBP17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 TSEN2Q8NCE0 465 aaKnown RBP17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 GALNT11Q8NCW6 608 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 SPRY4Q9C004 299 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 STN1Q9H668 368 aaKnown RBP17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 PDFQ9HBH1 243 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 PDP2Q9P2J9 529 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 B4GALT6Q9UBX8 382 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 RPS6KL1Q9Y6S9 549 aa17.77■□□□□ 0.44
TSPAN3-208ENST00000560514 UNC79Q9P2D8 2635 aa17.77■□□□□ 0.43
TSPAN3-208ENST00000560514 TRBV23OR9-2A0A075B6M9 112 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 INPP4BO15327 924 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 FUCA1P04066 466 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 IVLP07476 585 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 MMP8P22894 467 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 STAT5AP42229 794 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 RGRP47804 291 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 SCNN1BP51168 640 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 NDST2P52849 883 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 ERV3-1Q14264 604 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 CAPRIN2Q6IMN6 1127 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 WDR74Q6RFH5 385 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 ZNF677Q86XU0 584 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 FAM114A1Q8IWE2 563 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 EPS8L1Q8TE68 723 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 NCSTNQ92542 709 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 COQ10AQ96MF6 247 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 OR2M4Q96R27 311 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 SP110Q9HB58 689 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 POLHQ9Y253 713 aa17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 MRPS18BQ9Y676 258 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-208ENST00000560514 A0A1W2PQ67 120 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 RFPL1O75677 317 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 DESP17661 470 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 DLSTP36957 453 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 FASLGP48023 281 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 POLD2P49005 469 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 AIF1P55008 147 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 TPI1P60174 286 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 NSUN2Q08J23 767 aaKnown RBP eCLIP17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 MAP7Q14244 749 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 ARHGAP22Q7Z5H3 698 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 CPT1CQ8TCG5 803 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 PDCD6IPQ8WUM4 868 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 CELF6Q96J87 481 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 NDST4Q9H3R1 872 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 LRRC19Q9H756 370 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 APMAPQ9HDC9 416 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 CUEDC1Q9NWM3 386 aaPredicted RBP17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 SLC17A4Q9Y2C5 497 aa17.75■□□□□ 0.43
TSPAN3-208ENST00000560514 ESPL1Q14674 2120 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 ANKRD62A6NC57 917 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 K7EM74 188 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 KATNA1O75449 491 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 CYP2A6P11509 494 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms