RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CASQ2O14958 399 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 AURKAO14965 403 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 PEX1O43933 1283 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 SOAT2O75908 522 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 CD1DP15813 335 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ZNF37AP17032 561 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 LAG3P18627 525 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 LPOP22079 712 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 CORO1AP31146 461 aaKnown RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 GMPRP36959 345 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 MAPK8P45983 427 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 CSNK1DP48730 415 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 MRPL19P49406 292 aaKnown RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 TTPAP49638 278 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 GATMP50440 423 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ARSDP51689 593 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 AP1S1P61966 158 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 HERVK_113P63132 956 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 SPATS1Q496A3 300 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ZNF678Q5SXM1 525 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 KIAA1841Q6NSI8 718 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 TXNDC11Q6PKC3 985 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 BNC2Q6ZN30 1099 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 ISCA2Q86U28 154 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 CUZD1Q86UP6 607 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ITIH5Q86UX2 942 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 FAM217AQ8IXS0 508 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 TCEAL8Q8IYN2 117 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 CLYBLQ8N0X4 340 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.7□□□□□ -0.86
RTF1-206ENST00000560447 POU5F2Q8N7G0 328 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 BLOC1S5Q8TDH9 187 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 BCL7CQ8WUZ0 217 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 DNAJC1Q96KC8 554 aaKnown RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 PRICKLE1Q96MT3 831 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 ZNF558Q96NG5 402 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 LENG8Q96PV6 779 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 NR1H4Q96RI1 486 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 ZNF184Q99676 751 aaPredicted RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 C1QTNF3Q9BXJ4 246 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ERVK-6Q9BXR3 956 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 NUF2Q9BZD4 464 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 HIPK3Q9H422 1215 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 GSTO2Q9H4Y5 243 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 GTSE1Q9NYZ3 720 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 SARDHQ9UL12 918 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 AGO1Q9UL18 857 aaKnown RBP9.7□□□□□ -0.86
RTF1-206ENST00000560447 POMPQ9Y244 141 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 YIPF1Q9Y548 306 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 BBIP1A8MTZ0 92 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 STX16-NPEPL1H3BU86 382 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 GFRA2O00451 464 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 STX16O14662 325 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 MUSKO15146 869 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 KERAO60938 352 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 NDUFS3O75489 264 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 GJB5O95377 273 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 OLFM2O95897 454 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 F11P03951 625 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 RPSAP08865 295 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 EPHA3P29320 983 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 PMLP29590 882 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CDKN2DP55273 166 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 KLC1Q07866 573 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 GRIK2Q13002 908 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 ZNF460Q14592 562 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CYTH1Q15438 398 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 TAF12Q16514 161 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 ZNF789Q5FWF6 425 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 MPP7Q5T2T1 576 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 IRAK1BP1Q5VVH5 260 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 UGT3A1Q6NUS8 523 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 TAS1R1Q7RTX1 841 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 KDELC2Q7Z4H8 507 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 GLT6D1Q7Z4J2 308 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 DHDDSQ86SQ9 333 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 TMEM173Q86WV6 379 aaPredicted RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 CIR1Q86X95 450 aaPredicted RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 SNX32Q86XE0 403 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CMTR2Q8IYT2 770 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 SLC39A11Q8N1S5 342 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 DCAF4L2Q8NA75 395 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CATSPER1Q8NEC5 780 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 OR7D4Q8NG98 312 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 STAG3L4Q8TBR4 150 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 TSPEARQ8WU66 669 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 ANKRD49Q8WVL7 239 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 LPGAT1Q92604 370 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.69□□□□□ -0.86
RTF1-206ENST00000560447 TMEM169Q96HH4 297 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 B3GALT6Q96L58 329 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 NDNQ99608 321 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CCT7Q99832 543 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 CLSTN3Q9BQT9 956 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 NUSAP1Q9BXS6 441 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms