RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 KELP23276 732 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 MAOBP27338 520 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 TEAD1P28347 426 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 SPAM1P38567 509 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 HADHAP40939 763 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 SPINT3P49223 89 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 THOP1P52888 689 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
USP3-216ENST00000559873 YPEL5P62699 121 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PTSQ03393 145 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 OLIG2Q13516 323 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PTK2BQ14289 1009 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 MORF4L2Q15014 288 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 IRF4Q15306 451 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 TRIM61Q5EBN2 209 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 IZUMO3Q5VZ72 239 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PDPK2PQ6A1A2 396 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 RAET1GQ6H3X3 334 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 DENND5AQ6IQ26 1287 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 LRRC8BQ6P9F7 803 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 IL27RAQ6UWB1 636 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 HSD11B1LQ7Z5J1 315 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 TMC3Q7Z5M5 1100 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PTAR1Q7Z6K3 402 aaPredicted RBP10.06□□□□□ -0.8
USP3-216ENST00000559873 NLRP8Q86W28 1048 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 MFSD2AQ8NA29 543 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 TP53I13Q8NBR0 393 aaPredicted RBP10.06□□□□□ -0.8
USP3-216ENST00000559873 MCUQ8NE86 351 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 OR52K1Q8NGK4 314 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
USP3-216ENST00000559873 KLK6Q92876 244 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 PLEKHG4BQ96PX9 1271 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 RANBP9Q96S59 729 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 ORAI3Q9BRQ5 295 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 ERP44Q9BS26 406 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 ZDHHC5Q9C0B5 715 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 FAM83DQ9H4H8 585 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 TM9SF3Q9HD45 589 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 FZD3Q9NPG1 666 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 GDF3Q9NR23 364 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 SLC6A14Q9UN76 642 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 COQ6Q9Y2Z9 468 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 SPO11Q9Y5K1 396 aa10.06□□□□□ -0.8
USP3-216ENST00000559873 RIF1Q5UIP0 2472 aaKnown RBP10.06□□□□□ -0.8
USP3-216ENST00000559873 EP300Q09472 2414 aaPredicted RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 VILLO15195 856 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 RAD51CO43502 376 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 THEGLP0DJG4 465 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 IGFALSP35858 605 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 GPR1P46091 355 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 NPY2RP49146 381 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 TERF1P54274 439 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 SESN2P58004 480 aaPredicted RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 DPTQ07507 201 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 ITGA9Q13797 1035 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 FGL2Q14314 439 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 POU6F1Q14863 301 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 CDKN3Q16667 212 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 GLE1Q53GS7 698 aaKnown RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 DNAJC21Q5F1R6 531 aaKnown RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 RNASEH2BQ5TBB1 312 aaKnown RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 SLC23A3Q6PIS1 610 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 GCNT7Q6ZNI0 430 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 Q6ZVL8 140 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 TECPR1Q7Z6L1 1165 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 ABI3BPQ7Z7G0 1075 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 PDIK1LQ8N165 341 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 CBARPQ8N350 705 aaPredicted RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 MMGT1Q8N4V1 131 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 OXR1Q8N573 874 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 NAT8LQ8N9F0 302 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 DTX3LQ8TDB6 740 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 PEX13Q92968 403 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 CENPTQ96BT3 561 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 KLF6Q99612 283 aaPredicted RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 PHPT1Q9NRX4 125 aaPredicted RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 SAMD15Q9P1V8 674 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 CD84Q9UIB8 345 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 APPL1Q9UKG1 709 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 ARL5AQ9Y689 179 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 PIEZO1Q92508 2521 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 CEP192Q8TEP8 1941 aa10.05□□□□□ -0.8
USP3-216ENST00000559873 TNRC6BQ9UPQ9 1833 aaKnown RBP10.05□□□□□ -0.8
USP3-216ENST00000559873 GLYATL1P3A0A0U1RQE8 302 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TLR4O00206 839 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 RAD51BO15315 384 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 YKT6O15498 198 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 TMEM63AO94886 807 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 SEC31AO94979 1220 aaKnown RBP10.04□□□□□ -0.8
USP3-216ENST00000559873 CER1O95813 267 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 MYCLP1P12525 358 aaPredicted RBP10.04□□□□□ -0.8
USP3-216ENST00000559873 ADRA1DP25100 572 aa10.04□□□□□ -0.8
USP3-216ENST00000559873 ZNF140P52738 457 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms