RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MUC20Q8N307 709 aaPredicted RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 PGBD5Q8N414 524 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 POC1AQ8NBT0 407 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ZCCHC10Q8TBK6 192 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 USP6NLQ92738 828 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 FAM120BQ96EK7 910 aaKnown RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 SCMH1Q96GD3 660 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 SPATA17Q96L03 361 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 PKP4Q99569 1192 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 EPYCQ99645 322 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ITPAQ9BY32 194 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ZWILCHQ9H900 591 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 MRGBPQ9NV56 204 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 PPP1R14DQ9NXH3 145 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 NDRG3Q9UGV2 375 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 CNOT7Q9UIV1 285 aaKnown RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 ERRFI1Q9UJM3 462 aaPredicted RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 RPS6KA6Q9UK32 745 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 NAALADL1Q9UQQ1 740 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 LYVE1Q9Y5Y7 322 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 PSAT1Q9Y617 370 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 PIAS3Q9Y6X2 628 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ARHGAP10A1A4S6 786 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 AGAP14A8MT82 685 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 BMPR1BO00238 502 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 TSPAN4O14817 238 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 WNT9BO14905 357 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 KLK10O43240 276 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 MTA2O94776 668 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 BAG2O95816 211 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 UBL4AP11441 157 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 PCNAP12004 261 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 AMD1P17707 334 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 EPHA8P29322 1005 aaPredicted RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 BLKP51451 505 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 RARSP54136 660 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 YWHAZP63104 245 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 MC1RQ01726 317 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 DDR1Q08345 913 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 TBL3Q12788 808 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 DHX34Q14147 1143 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 RASA2Q15283 850 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 TBCEQ15813 527 aaPredicted RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 DUSP28Q4G0W2 176 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 FAM69AQ5T7M9 428 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 NAPEPLDQ6IQ20 393 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 UNQ6126/PRO20091Q6UXV3 157 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 SHFQ7M4L6 423 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 GALNT13Q8IUC8 556 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 ETNPPLQ8TBG4 499 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 GDPD5Q8WTR4 605 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 RAB40AQ8WXH6 277 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 CNOT9Q92600 299 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 CNDP2Q96KP4 475 aaKnown RBP3.78□□□□□ -1.8
SPG11-218ENST00000559754 DOCK7Q96N67 2140 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 CD180Q99467 661 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 MUC13Q9H3R2 512 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 ZNF711Q9Y462 761 aa3.78□□□□□ -1.8
SPG11-218ENST00000559754 KDM3AQ9Y4C1 1321 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 C17orf113A0A1B0GUU1 675 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 VILLO15195 856 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ERAL1O75616 437 aaKnown RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 NDUFB4O95168 129 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 CCNDBP1O95273 360 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 PGM3O95394 542 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 HSPA4LO95757 839 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 PLGP00747 810 aaPredicted RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 UMODP07911 640 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 PTPN2P17706 415 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ACSL1P33121 698 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 NNMTP40261 264 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 PSMB10P40306 273 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ARL1P40616 181 aaPredicted RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 NLRP5P59047 1200 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 TROAPQ12815 778 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ILF3Q12906 894 aaKnown RBP eCLIP3.77□□□□□ -1.81
SPG11-218ENST00000559754 PTP4A2Q12974 167 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 STK4Q13043 487 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 RUNX2Q13950 521 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 SCARB2Q14108 478 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 NFIL3Q16649 462 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 FAM69BQ5VUD6 431 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 GPR139Q6DWJ6 353 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 SZRD1Q7Z422 152 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 LURAP1LQ8IV03 231 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 CPXM2Q8N436 756 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 TTC39CQ8N584 583 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ZNF713Q8N859 430 aaPredicted RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 LMNTD1Q8N9Z9 388 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 METTL6Q8TCB7 284 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 SECTM1Q8WVN6 248 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 STAMQ92783 540 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 CALML4Q96GE6 196 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 CDHR1Q96JP9 859 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 NODALQ96S42 347 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 MXD3Q9BW11 206 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 MRPL9Q9BYD2 267 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms