RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ZNF30P17039 623 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 HNRNPA2B1P22626 353 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 MAGEA3P43357 314 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SPINT3P49223 89 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 EPHB1P54762 984 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 PFN3P60673 137 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 BASP1P80723 227 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 TUBB2AQ13885 445 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DHX34Q14147 1143 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 IRF4Q15306 451 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 CCDC6Q16204 474 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 CERCAMQ5T4B2 595 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 KCTD16Q68DU8 428 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DUPD1Q68J44 220 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SYDE1Q6ZW31 735 aaPredicted RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 CYP2U1Q7Z449 544 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SPATS2Q86XZ4 545 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SYT12Q8IV01 421 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ZCCHC9Q8N567 271 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DCLK2Q8N568 766 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 GPR26Q8NDV2 337 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 GRK7Q8WTQ7 553 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 PIGKQ92643 395 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 SCAMP4Q969E2 229 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ZNF778Q96MU6 729 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 WDR83Q9BRX9 315 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 TUBB2BQ9BVA1 445 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 FSD1LQ9BXM9 530 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ABCG8Q9H221 673 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ARRDC1-AS1Q9H2J1 176 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 CAPN10Q9HC96 672 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 GRHL1Q9NZI5 618 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 FEZ2Q9UHY8 353 aaPredicted RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 TMPRSS11EQ9UL52 423 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 TPX2Q9ULW0 747 aaKnown RBP9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DMTF1Q9Y222 760 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 PCDHGA5Q9Y5G8 931 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 ARL5AQ9Y689 179 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 DNAH14Q0VDD8 3507 aa9.03□□□□□ -0.96
HMG20A-209ENST00000559728 OTOGLQ3ZCN5 2332 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MEI4A8MW99 385 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 PRAMEF26H0Y7S4 382 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 AVILO75366 819 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SEC31AO94979 1220 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 BPIP17213 487 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 HMGCLP35914 325 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 TRIM23P36406 574 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 NUDT1P36639 197 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MPLP40238 635 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 RPL21P46778 160 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 CSNK1EP49674 416 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 ZNF140P52738 457 aaPredicted RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 TERF1P54274 439 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 RACK1P63244 317 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 XIAPP98170 497 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 CDK16Q00536 496 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 CKAP4Q07065 602 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 DPTQ07507 201 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 CBLBQ13191 982 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MTM1Q13496 603 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SETMARQ53H47 684 aaPredicted RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 WDR45BQ5MNZ6 344 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 HENMT1Q5T8I9 393 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 DENND2CQ68D51 928 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 TCEAL6Q6IPX3 200 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 HIBCHQ6NVY1 386 aaPredicted RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 ESRP1Q6NXG1 681 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 LRRC8BQ6P9F7 803 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 ZDHHC24Q6UX98 284 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 NLRP8Q86W28 1048 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 RAVER1Q8IY67 606 aaKnown RBP9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MPP5Q8N3R9 675 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MCUQ8NE86 351 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 DENND6BQ8NEG7 585 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 OR13C4Q8NGS5 318 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 BRSK1Q8TDC3 778 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 BLOC1S5Q8TDH9 187 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SEC14L1Q92503 715 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SNX19Q92543 992 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 TCEAL3Q969E4 200 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SERAC1Q96JX3 654 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 PWWP2AQ96N64 755 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 RUNDC3BQ96NL0 473 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 SERPINB12Q96P63 405 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 MYOCQ99972 504 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 CARD6Q9BX69 1037 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 FAM117AQ9C073 453 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 TRABDQ9H4I3 376 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 PLAC1Q9HBJ0 212 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 IL26Q9NPH9 171 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 RXFP3Q9NSD7 469 aa9.02□□□□□ -0.97
HMG20A-209ENST00000559728 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms