RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ADRA1DP25100 572 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 NMBRP28336 390 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 RPL26P61254 145 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 GALNT3Q14435 633 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 LGSNQ5TDP6 509 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ANO7Q6IWH7 933 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 CAMKK1Q8N5S9 505 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PPP1R16AQ96I34 528 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PRMT8Q9NR22 394 aaPredicted RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 EBF1Q9UH73 591 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PHTF1Q9UMS5 762 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 RPL26L1Q9UNX3 145 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 A0A1W2PP55 124 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ANKRD66B4E2M5 251 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PLK4O00444 970 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 TYROBPO43914 113 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 KRT37O76014 449 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ERVK-10P10266 1014 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 CNTN1Q12860 1018 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 POU6F1Q14863 301 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 QPCTQ16769 361 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 UGP2Q16851 508 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 SIRPB2Q5JXA9 342 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PIP5KL1Q5T9C9 394 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ERN2Q76MJ5 926 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 HDDC3Q8N4P3 179 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 PPHLN1Q8NEY8 458 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 LPCAT1Q8NF37 534 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 DENND1AQ8TEH3 1009 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ALKBH8Q96BT7 664 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 MTBPQ96DY7 904 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ZNF778Q96MU6 729 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 ADGRE3Q9BY15 652 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 KCNK9Q9NPC2 374 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 INTS9Q9NV88 658 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 SERGEFQ9UGK8 458 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 SMG5Q9UPR3 1016 aaKnown RBP16.56■□□□□ 0.24
TPM1-219ENST00000559397 ZDBF2Q9HCK1 2354 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 CACNA1IQ9P0X4 2223 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 HMX2A2RU54 273 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 FAM86C2PA6NEL3 165 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 FAM47DPA6NHR8 397 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 KRT38O76015 456 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 MT-ND3P03897 115 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 HLA-DPA1P20036 260 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 CNTFP26441 200 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 P2RY2P41231 377 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 ABL2P42684 1182 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 GRIA4P48058 902 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 POLR2LP62875 67 aaKnown RBP16.55■□□□□ 0.24
TPM1-219ENST00000559397 PPARDQ03181 441 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 SLC18A2Q05940 514 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 AGBL4Q5VU57 503 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 KIAA1324Q6UXG2 1013 aaKnown RBP16.55■□□□□ 0.24
TPM1-219ENST00000559397 PACS1Q6VY07 963 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 TIFABQ6ZNK6 161 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 MAML2Q8IZL2 1156 aaPredicted RBP16.55■□□□□ 0.24
TPM1-219ENST00000559397 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 SMIM14Q96QK8 99 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 CCDC134Q9H6E4 229 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 ITM2CQ9NQX7 267 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 TREX1Q9NSU2 369 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 FBXL12Q9NXK8 326 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 MYLKQ15746 1914 aa16.55■□□□□ 0.24
TPM1-219ENST00000559397 A0A0J9YYE9 177 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 UPK3BL1B0FP48 263 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 UPK3BL2E5RIL1 263 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 SPINT1O43278 529 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 TRBC1P01850 177 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 PRKCGP05129 697 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 FGF1P05230 155 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 TDGF1P13385 188 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 ADRB3P13945 408 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 KRT4P19013 534 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 NEK3P51956 506 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 TEDDM1Q5T9Z0 273 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 USP30Q70CQ3 517 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 TTC7BQ86TV6 843 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 C1orf210Q8IVY1 113 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 PGBD3Q8N328 593 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 RMDN1Q96DB5 314 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 MCCC1Q96RQ3 725 aaPredicted RBP16.54■□□□□ 0.24
TPM1-219ENST00000559397 PPANQ9NQ55 473 aaKnown RBP16.54■□□□□ 0.24
TPM1-219ENST00000559397 USP36Q9P275 1121 aaKnown RBP16.54■□□□□ 0.24
TPM1-219ENST00000559397 SLC17A6Q9P2U8 582 aa16.54■□□□□ 0.24
TPM1-219ENST00000559397 HEATR9A2RTY3 570 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 IGLV3-19P01714 112 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 ACADMP11310 421 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 CTPS1P17812 591 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 AVPR2P30518 371 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 HOXA6P31267 233 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 ARCN1P48444 511 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms