RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FAM133BQ5BKY9 247 aaKnown RBP11.2□□□□□ -0.62
CASC4-208ENST00000559151 Q6ZSV7 163 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 ZNF367Q7RTV3 350 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 TMEM199Q8N511 208 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 NANOGP1Q8N7R0 232 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 GCNAQ96QF7 691 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
CASC4-208ENST00000559151 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
CASC4-208ENST00000559151 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 ZNF711Q9Y462 761 aa11.2□□□□□ -0.62
CASC4-208ENST00000559151 A0A1W2PR77 199 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 H0YGN5 161 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 OGG1O15527 345 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 FGBP02675 491 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 FGF2P09038 288 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 G6PDP11413 515 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 CD58P19256 250 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 MMP13P45452 471 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
CASC4-208ENST00000559151 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 PTGR1Q14914 329 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 EIF2S3LQ2VIR3 472 aaKnown RBP11.19□□□□□ -0.62
CASC4-208ENST00000559151 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 AACSQ86V21 672 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 MMP21Q8N119 569 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 SPATA6LQ8N4H0 392 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 OR8K5Q8NH50 307 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
CASC4-208ENST00000559151 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 KRCC1Q9NPI7 259 aaPredicted RBP11.19□□□□□ -0.62
CASC4-208ENST00000559151 OR6C3Q9NZP0 311 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 FRMD4BQ9Y2L6 1034 aa11.19□□□□□ -0.62
CASC4-208ENST00000559151 J3KR12 359 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 ARSBP15848 533 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 STAT2P52630 851 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 TRAF1Q13077 416 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 ADGRA1Q86SQ6 560 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 TSPAN33Q86UF1 283 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 MIGA1Q8NAN2 632 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 TRIB2Q92519 343 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 KCNN2Q9H2S1 579 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 PPP1R3EQ9H7J1 279 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 ARHGEF38Q9NXL2 777 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 PTGFRNQ9P2B2 879 aa11.18□□□□□ -0.62
CASC4-208ENST00000559151 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
CASC4-208ENST00000559151 MS4A18H0YCH9 400 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 UBE2CO00762 179 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 ADAMDEC1O15204 470 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 GPC4O75487 556 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 CSPG5O95196 566 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 ACTN1P12814 892 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 TNFRSF1BP20333 461 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 MAOAP21397 527 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 GPTP24298 496 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 ZP1P60852 638 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
CASC4-208ENST00000559151 MRPS34P82930 218 aaKnown RBP11.17□□□□□ -0.62
CASC4-208ENST00000559151 PRPF4BQ13523 1007 aaKnown RBP11.17□□□□□ -0.62
CASC4-208ENST00000559151 TNFAIP1Q13829 316 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 CTTNQ14247 550 aaKnown RBP11.17□□□□□ -0.62
CASC4-208ENST00000559151 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 HACE1Q8IYU2 909 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 APPL2Q8NEU8 664 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 SLC25A28Q96A46 364 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 EGLN2Q96KS0 407 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
CASC4-208ENST00000559151 PIGMQ9H3S5 423 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 CATSPERBQ9H7T0 1116 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 BTBD3Q9Y2F9 522 aa11.17□□□□□ -0.62
CASC4-208ENST00000559151 TIMM23O14925 209 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 ITM2AO43736 263 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 DAB1O75553 588 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 MMP9P14780 707 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 PRCPP42785 496 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 ME1P48163 572 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 RFX5P48382 616 aaPredicted RBP11.16□□□□□ -0.62
CASC4-208ENST00000559151 PNLIPRP2P54317 469 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 CDC16Q13042 620 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 Q6ZTK2 550 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 AVL9Q8NBF6 648 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 SPRTNQ9H040 489 aaPredicted RBP11.16□□□□□ -0.62
CASC4-208ENST00000559151 MARCH4Q9P2E8 410 aaPredicted RBP11.16□□□□□ -0.62
CASC4-208ENST00000559151 COPG2Q9UBF2 871 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 SLC9A2Q9UBY0 812 aa11.16□□□□□ -0.62
CASC4-208ENST00000559151 ARHGEF40Q8TER5 1519 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 LRRC72A6NJI9 287 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 CYP1A2P05177 515 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 LMAN1P49257 510 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 SUOXP51687 545 aa11.15□□□□□ -0.62
CASC4-208ENST00000559151 TSPY1Q01534 308 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms