RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 HSD17B4P51659 736 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 STAT2P52630 851 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PMS2P54278 862 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PNLIPRP2P54317 469 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 TAS2R40P59535 323 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KLF9Q13886 244 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 BAATQ14032 418 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 SGO1Q5FBB7 561 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PPP6R3Q5H9R7 873 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 MTX3Q5HYI7 312 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PXDC1Q5TGL8 231 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 ASPHD1Q5U4P2 390 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KRT79Q5XKE5 535 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PMS2CLQ68D20 193 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 SIGIRRQ6IA17 410 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KIAA0930Q6ICG6 404 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 SLC2A7Q6PXP3 512 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 SLC16A12Q6ZSM3 486 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 MON1BQ7L1V2 547 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 NOXA1Q86UR1 476 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 ZKSCAN4Q969J2 545 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 SLC22A18Q96BI1 424 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 ELMOD3Q96FG2 381 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 CNDP2Q96KP4 475 aaKnown RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 PCGF1Q9BSM1 259 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 CENPOQ9BU64 300 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 MSTO1Q9BUK6 570 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KIFC3Q9BVG8 833 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 APOL6Q9BWW8 343 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 TKTL2Q9H0I9 626 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 SIL1Q9H173 461 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 HRH4Q9H3N8 390 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KRCC1Q9NPI7 259 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 TAB2Q9NYJ8 693 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 COG5Q9UP83 839 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 BTBD3Q9Y2F9 522 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 KANSL1LA0AUZ9 987 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 A8MV72 311 aaPredicted RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 VWA5AO00534 786 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 OGG1O15527 345 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 SYF2O95926 243 aaKnown RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 TPOP07202 933 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 ARSBP15848 533 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 UBA1P22314 1058 aaKnown RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 GNLYP22749 145 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 HOXD9P28356 352 aaPredicted RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 METAP2P50579 478 aaKnown RBP eCLIP4.49□□□□□ -1.69
CASC4-206ENST00000558847 SELENOVP59797 346 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 KCNC3Q14003 757 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 PCLAFQ15004 111 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 CDONQ4KMG0 1287 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 BMP2KLQ5H9B9 411 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 SPECC1Q5M775 1068 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 RARS2Q5T160 578 aaKnown RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 OTUD1Q5VV17 481 aaPredicted RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 DCAF12L2Q5VW00 463 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 PQLC2Q6ZP29 291 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 CFAP77Q6ZQR2 320 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 TSPAN33Q86UF1 283 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 GPSM1Q86YR5 675 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 MMP21Q8N119 569 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 APPL2Q8NEU8 664 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 TRPC4APQ8TEL6 797 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 FIZ1Q96SL8 496 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 TMEM79Q9BSE2 394 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 NDST4Q9H3R1 872 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 MAGIXQ9H6Y5 334 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 SLC28A3Q9HAS3 691 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 LTB4R2Q9NPC1 389 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 GPR108Q9NPR9 543 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 HINT3Q9NQE9 182 aaKnown RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 SETD4Q9NVD3 440 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 TMEM51Q9NW97 253 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 TRNAU1APQ9NX07 287 aaKnown RBP4.49□□□□□ -1.69
CASC4-206ENST00000558847 ARHGEF38Q9NXL2 777 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 RAI2Q9Y5P3 530 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 STON1Q9Y6Q2 735 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 FAM169AQ9Y6X4 670 aa4.49□□□□□ -1.69
CASC4-206ENST00000558847 OR2A25A4D2G3 310 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 KDM4EB2RXH2 506 aaPredicted RBP4.48□□□□□ -1.69
CASC4-206ENST00000558847 ADAM10O14672 748 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 AVILO75366 819 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 APOA4P06727 396 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 TMEM191BP0C7N4 346 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 MAOAP21397 527 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 RRM1P23921 792 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 LIG4P49917 911 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 ARSEP51690 589 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 CDC16Q13042 620 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 TNFAIP1Q13829 316 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 PNLIPRP3Q17RR3 467 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 TCP11X2Q5H9J9 407 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 ZNF425Q6IV72 752 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 FBXO46Q6PJ61 603 aaPredicted RBP4.48□□□□□ -1.69
CASC4-206ENST00000558847 SHC4Q6S5L8 630 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 CRELD2Q6UXH1 353 aaPredicted RBP4.48□□□□□ -1.69
CASC4-206ENST00000558847 DPPA4Q7L190 304 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 HAPLN4Q86UW8 402 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 CCDC13Q8IYE1 715 aa4.48□□□□□ -1.69
CASC4-206ENST00000558847 SCML4Q8N228 414 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms