RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CNGA3Q16281 694 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ITPRIPL1Q6GPH6 555 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 CRTC1Q6UUV9 634 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ENPP7Q6UWV6 458 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ZNF765Q7L2R6 523 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 TECPR1Q7Z6L1 1165 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 CDKL3Q8IVW4 592 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 FSTL5Q8N475 847 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 FAM181AQ8N9Y4 354 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 OR4C6Q8NH72 309 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ACTL9Q8TC94 416 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ALG3Q92685 438 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 GLMNQ92990 594 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 TADA1Q96BN2 335 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 LRRC45Q96CN5 670 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 NUS1Q96E22 293 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 DTD2Q96FN9 168 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 HES6Q96HZ4 224 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 CNDP2Q96KP4 475 aaKnown RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 WDR92Q96MX6 357 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ALS2CR12Q96Q35 445 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 FCRL5Q96RD9 977 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 FRMD8P1Q9BZ68 369 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 PHPT1Q9NRX4 125 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 KLHL8Q9P2G9 620 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 BTBD3Q9Y2F9 522 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 AAR2Q9Y312 384 aaKnown RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 DGKBQ9Y6T7 804 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ADAMTS9Q9P2N4 1935 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 NYNRINQ9P2P1 1898 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 FAM221BA6H8Z2 402 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6BA6NDN3 693 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 CAPN8A6NHC0 703 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 NPIPB15A6NHN6 443 aaPredicted RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 LMO7DNF2Z398 122 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 AQP9O43315 295 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 ANXA9O76027 345 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 DKK1O94907 266 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 NDST3O95803 873 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 FTCDO95954 541 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 PCCBP05166 539 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 ANXA6P08133 673 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 CTPS1P17812 591 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 STIP1P31948 543 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 GPR1P46091 355 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 RPIAP49247 311 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 HK3P52790 923 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 EIF3EP60228 445 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 SRP54P61011 504 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 OTUD4Q01804 1114 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 SEMG2Q02383 582 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 WASHC5Q12768 1159 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 EIF2B5Q13144 721 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 MPP3Q13368 585 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 PRPSAP1Q14558 356 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 RPS6KA1Q15418 735 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 QPCTQ16769 361 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 ZNF542PQ5EBM4 170 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 LRRC66Q68CR7 880 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 DENND2CQ68D51 928 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 DARS2Q6PI48 645 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 Q6ZVL8 140 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 HSD11B1LQ7Z5J1 315 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 SLCO6A1Q86UG4 719 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GKN2Q86XP6 184 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 PHACTR4Q8IZ21 702 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GALNT15Q8N3T1 639 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 LPCAT1Q8NF37 534 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 OR56A4Q8NGH8 313 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 AP2M1Q96CW1 435 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 QKIQ96PU8 341 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM1-213ENST00000558400 RBM15Q96T37 977 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM1-213ENST00000558400 TEX101Q9BY14 249 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 TRABDQ9H4I3 376 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 WDR26Q9H7D7 661 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 ZFYVE1Q9HBF4 777 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM1-213ENST00000558400 PKD2L2Q9NZM6 624 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 HACD3Q9P035 362 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 TRIM10Q9UDY6 481 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 KLQ9UEF7 1012 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 APOBEC3BQ9UH17 382 aaKnown RBP8.47□□□□□ -1.05
TPM1-213ENST00000558400 DOLKQ9UPQ8 538 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 OR1A2Q9Y585 309 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 DOCK9Q9BZ29 2069 aa8.47□□□□□ -1.05
TPM1-213ENST00000558400 C1orf232A0A0U1RR37 186 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 LOC285095A0A1B0GVY8 99 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 K7ESM1 405 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 DDX3YO15523 660 aaKnown RBP8.46□□□□□ -1.06
TPM1-213ENST00000558400 SIGLEC6O43699 453 aa8.46□□□□□ -1.06
TPM1-213ENST00000558400 SDC3O75056 442 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms