RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PDE2AO00408 941 aaPredicted RBP11.9□□□□□ -0.5
HERC1-202ENST00000558324 APOL1O14791 398 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 TNFRSF10CO14798 259 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 FZD6O60353 706 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 JCHAINP01591 159 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 TRBC1P01850 177 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 RPLP0P05388 317 aaKnown RBP11.9□□□□□ -0.5
HERC1-202ENST00000558324 HOXC4P09017 264 aaPredicted RBP11.9□□□□□ -0.5
HERC1-202ENST00000558324 KRT10P13645 584 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 GPR1P46091 355 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 POLD2P49005 469 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 DYNLT1P63172 113 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 AP1B1Q10567 949 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 ZBTB17Q13105 803 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 ODF2Q5BJF6 829 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 ALG1LQ6GMV1 187 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 NPNTQ6UXI9 565 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 TRIM74Q86UV6 250 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 RFX6Q8HWS3 928 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 PLD5Q8N7P1 536 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 ARRDC2Q8TBH0 407 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 MAK16Q9BXY0 300 aaKnown RBP11.9□□□□□ -0.5
HERC1-202ENST00000558324 TEX101Q9BY14 249 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 ABCG8Q9H221 673 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 SEPT10Q9P0V9 454 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 SPOPO43791 374 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 NOBOXO60393 691 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 TCEA3O75764 348 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 MTA2O94776 668 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 FUCA1P04066 466 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 CEACAM5P06731 702 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 CA4P22748 312 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 CD86P42081 329 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 ARHGAP25P42331 645 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 LSSP48449 732 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 PDX1P52945 283 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 PCBP4P57723 403 aaKnown RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 CCL7P80098 99 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 PPIDQ08752 370 aaKnown RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 TBX2Q13207 712 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 GALNT3Q14435 633 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 MARK2Q7KZI7 788 aaKnown RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 CBARPQ8N350 705 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 GPR156Q8NFN8 814 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 FATE1Q969F0 183 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 GFM1Q96RP9 751 aaKnown RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 FOXP3Q9BZS1 431 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 EPB41L5Q9HCM4 733 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 KCTD5Q9NXV2 234 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 SUFUQ9UMX1 484 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 TMEM98Q9Y2Y6 226 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 PPIL1Q9Y3C6 166 aa11.89□□□□□ -0.51
HERC1-202ENST00000558324 ANKRD11Q6UB99 2663 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
HERC1-202ENST00000558324 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 A0A1W2PQM1 296 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 D6RAR5 112 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 INPP4BO15327 924 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 CLDN7O95471 211 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 SOD1P00441 154 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 PRLP01236 227 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 SLC4A1P02730 911 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ZNF30P17039 623 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 COMTP21964 271 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 CES1P23141 567 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 AK4P27144 223 aaPredicted RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 RBMS1P29558 406 aaKnown RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 STC1P52823 247 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 MAZP56270 477 aaKnown RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 IFI35P80217 286 aaPredicted RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 PTSQ03393 145 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ILF3Q12906 894 aaKnown RBP eCLIP11.88□□□□□ -0.51
HERC1-202ENST00000558324 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 CERCAMQ5T4B2 595 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 SLC9A4Q6AI14 798 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 RHOT1Q8IXI2 618 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 WDR48Q8TAF3 677 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ZNF578Q96N58 590 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms