RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NRROSQ86YC3 692 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TICAM1Q8IUC6 712 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TRIM59Q8IWR1 403 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SRRM1Q8IYB3 904 aaKnown RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 SLC34A3Q8N130 599 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 NAGSQ8N159 534 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 BMPERQ8N8U9 685 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 MSANTD4Q8NCY6 345 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 PRR7Q8TB68 274 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 NCSTNQ92542 709 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SH3KBP1Q96B97 665 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TBC1D31Q96DN5 1066 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 MOCOSQ96EN8 888 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TUBGCP5Q96RT8 1024 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 CTRCQ99895 268 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 CRACR2AQ9BSW2 395 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 LGR4Q9BXB1 951 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SLC29A3Q9BZD2 475 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SCAND2PQ9GZW5 306 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 STN1Q9H668 368 aaKnown RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 WDR26Q9H7D7 661 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SUDS3Q9H7L9 328 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 NDFIP2Q9NV92 336 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 DONSONQ9NYP3 566 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 MAP4K5Q9Y4K4 846 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ATP6V1DQ9Y5K8 247 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ANKRD36A6QL64 1941 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 UNC79Q9P2D8 2635 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TRBV23OR9-2A0A075B6M9 112 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CDC14CA4D256 554 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 GOLGA6L4A6NEF3 574 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 WIPF3A6NGB9 483 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 RASA4BC9J798 803 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 GOLGA8SH3BPF8 625 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 J3QL48 77 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 FOXN3O00409 490 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 RASA4O43374 803 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 BUB1BO60566 1050 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 LRIG2O94898 1065 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 PIGNO95427 931 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 DLGAP3O95886 979 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CEACAM5P06731 702 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SLC9A1P19634 815 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 POU3F2P20265 443 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 F8A1P23610 371 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 NFKBIAP25963 317 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TNFRSF8P28908 595 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SERPINA4P29622 427 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CSF2RBP32927 897 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CLCN1P35523 988 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 FLT3P36888 993 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 MMP12P39900 470 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ADCY8P40145 1251 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ACTR1BP42025 376 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 STAT5AP42229 794 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 FASLGP48023 281 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CSNK1DP48730 415 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 PGDP52209 483 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 PMS2P54278 862 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ACTR1AP61163 376 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ATP11AP98196 1134 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CTBSQ01459 385 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 BCL2L1Q07817 233 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 NAA30Q147X3 362 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 ATP1A1-AS1Q5TC04 95 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ISM2Q6H9L7 571 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 KLHL10Q6JEL2 608 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TTI2Q6NXR4 508 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 GJB7Q6PEY0 223 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TRIM65Q6PJ69 517 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 DPPA4Q7L190 304 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ARCQ7LC44 396 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 BNIPLQ7Z465 357 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SRLQ86TD4 932 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SLC47A2Q86VL8 602 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 XYLT1Q86Y38 959 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CAMK1DQ8IU85 385 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CREBRFQ8IUR6 639 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 APLFQ8IW19 511 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 LZTR1Q8N653 840 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 NETO2Q8NC67 525 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 NELFBQ8WX92 580 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 PATE1Q8WXA2 126 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SEC14L1Q92503 715 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SHC3Q92529 594 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SNX21Q969T3 373 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CFAP57Q96MR6 1250 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ANP32EQ9BTT0 268 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SLC25A23Q9BV35 468 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TEX101Q9BY14 249 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TWSG1Q9GZX9 223 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 GOLPH3LQ9H4A5 285 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 ATP13A3Q9H7F0 1226 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 CATSPERBQ9H7T0 1116 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 PLCB1Q9NQ66 1216 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TMEM9Q9P0T7 183 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 LHX3Q9UBR4 397 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 APEX2Q9UBZ4 518 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms