RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TIMM22Q9Y584 194 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 A0A0J9YYE9 177 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 WASH4PA8MWX3 477 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 RAMP2O60895 175 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 FAM58BPP0C7Q3 252 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 MTHFD2P13995 350 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CAPN3P20807 821 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 GPX3P22352 226 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CDKN1CP49918 316 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-218ENST00000557439 NDST2P52849 883 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 GPR162Q16538 588 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 SLC22A9Q8IVM8 553 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 AFAP1L2Q8N4X5 818 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 TTC16Q8NEE8 873 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 ZFP28Q8NHY6 868 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 FAR2Q96K12 515 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 RANBP9Q96S59 729 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CCSER2Q9H7U1 834 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 MAP10Q9P2G4 905 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 GALPQ9UBC7 116 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 GLP2RO95838 553 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 C8BP07358 591 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 CYBAP13498 195 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 PRDX3P30048 256 aaKnown RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 HTR7P34969 479 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 RPL5P46777 297 aaKnown RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 KCNQ1P51787 676 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 HERVK_113P63132 956 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 LSAMPQ13449 338 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 IKBKEQ14164 716 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 KLHDC10Q6PID8 442 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 ZNF598Q86UK7 904 aaKnown RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 FBXO32Q969P5 355 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 ERVK-6Q9BXR3 956 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 SEMA4BQ9NPR2 832 aaPredicted RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 DDX18Q9NVP1 670 aaKnown RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 MARCH2Q9P0N8 246 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 TSR3Q9UJK0 312 aaKnown RBP17.7■□□□□ 0.42
XRCC3-218ENST00000557439 NME4O00746 187 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 FDXRP22570 491 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 FKBP1BP68106 108 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 TAF10Q12962 218 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 IRF5Q13568 498 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 MSANTD2Q6P1R3 559 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 TWIST2Q8WVJ9 160 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 SLC25A23Q9BV35 468 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 TMEM181Q9P2C4 612 aa17.7■□□□□ 0.42
XRCC3-218ENST00000557439 GREB1Q4ZG55 1949 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 CROCCQ5TZA2 2017 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 LOC285095A0A1B0GVY8 99 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SAC3D1A6NKF1 404 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 TNFAIP8O95379 198 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 GFAPP14136 432 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 ZNF37AP17032 561 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 TYMPP19971 482 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 FMO4P31512 558 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PBX3P40426 434 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 RGRP47804 291 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 CRHR2Q13324 411 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 MAPRE2Q15555 327 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 CATSPER1Q8NEC5 780 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 OR7D4Q8NG98 312 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 STON2Q8WXE9 905 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PPP1R2P1Q96PQ5 205 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SLC2A11Q9BYW1 496 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 AURKCQ9UQB9 309 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SPO11Q9Y5K1 396 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 COMMD3-BMI1R4GMX3 469 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PAPSS2O95340 614 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PSMC3P17980 439 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 DIO3P55073 304 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SERINC3Q13530 473 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 VARS2Q5ST30 1063 aaKnown RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 FAM45BPQ6NSW5 357 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PAQR3Q6TCH7 311 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 RASAL3Q86YV0 1011 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SPPL2CQ8IUH8 684 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 TEX26Q8N6G2 289 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 FAM45AQ8TCE6 357 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 TMIGD2Q96BF3 282 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 L3HYPDHQ96EM0 354 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SEPT5Q99719 369 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 SARDHQ9UL12 918 aa17.69■□□□□ 0.42
XRCC3-218ENST00000557439 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-218ENST00000557439 PDLIM1O00151 329 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 SOCS2O14508 198 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 ENPP3O14638 875 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 AKAP10O43572 662 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CHRM1P11229 460 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CCND3P30281 292 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-218ENST00000557439 AGTR2P50052 363 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 STX1BP61266 288 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 NRG1Q02297 640 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-218ENST00000557439 ZNF235Q14590 738 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 IFNEQ86WN2 208 aa17.68■□□□□ 0.42
XRCC3-218ENST00000557439 CHERPQ8IWX8 916 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms