RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MAMLD1Q13495 774 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 ERMARDQ5T6L9 678 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 Q6ZVL8 140 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
SLIRP-210ENST00000557431 C17orf82Q86X59 251 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-210ENST00000557431 ZSCAN1Q8NBB4 408 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 DTD2Q96FN9 168 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 GSDMCQ9BYG8 508 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 FRMD8Q9BZ67 464 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-210ENST00000557431 ZMYND15Q9H091 742 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 PHPT1Q9NRX4 125 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-210ENST00000557431 CWC15Q9P013 229 aaKnown RBP14.07□□□□□ -0.16
SLIRP-210ENST00000557431 TMEM98Q9Y2Y6 226 aa14.07□□□□□ -0.16
SLIRP-210ENST00000557431 NPIPB15A6NHN6 443 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-210ENST00000557431 A8MU76 341 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 LGALS16A8MUM7 142 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 DUX1O43812 170 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 PPFIA2O75334 1257 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 HOXC4P09017 264 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-210ENST00000557431 AMPD1P23109 780 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 VIPR1P32241 457 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 UGT1A3P35503 534 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 ILF3Q12906 894 aaKnown RBP eCLIP14.06□□□□□ -0.16
SLIRP-210ENST00000557431 ZNF235Q14590 738 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 SNAP47Q5SQN1 464 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 TMCO4Q5TGY1 634 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 ZNF438Q7Z4V0 828 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.06□□□□□ -0.16
SLIRP-210ENST00000557431 IL22RA1Q8N6P7 574 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 TMEM159Q96B96 161 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 TEX101Q9BY14 249 aa14.06□□□□□ -0.16
SLIRP-210ENST00000557431 PCYT1BQ9Y5K3 369 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-210ENST00000557431 IGHV1OR21-1A0A087WYE8 117 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 EFCAB7A8K855 629 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 STMND1H3BQB6 276 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 EML2O95834 649 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 SOD1P00441 154 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 CR2P20023 1033 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 IL1R2P27930 398 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 ADCY8P40145 1251 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 ACTR1BP42025 376 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 LIMK2P53671 638 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 ACTR1AP61163 376 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 AP1S1P61966 158 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 POLR2LP62875 67 aaKnown RBP14.05□□□□□ -0.16
SLIRP-210ENST00000557431 DPYSQ14117 519 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 NR1D2Q14995 579 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 TSR1Q2NL82 804 aaKnown RBP14.05□□□□□ -0.16
SLIRP-210ENST00000557431 TMEM164Q5U3C3 297 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 APTXQ7Z2E3 356 aaKnown RBP14.05□□□□□ -0.16
SLIRP-210ENST00000557431 FAM129CQ86XR2 697 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 PSKH2Q96QS6 385 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 TAAR9Q96RI9 348 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 AGAP2Q99490 1192 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 CTRCQ99895 268 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 SYT11Q9BT88 431 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 SLC25A18Q9H1K4 315 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 NOD2Q9HC29 1040 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 SEPT3Q9UH03 358 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 LIMA1Q9UHB6 759 aaKnown RBP14.05□□□□□ -0.16
SLIRP-210ENST00000557431 PRKAB1Q9Y478 270 aa14.05□□□□□ -0.16
SLIRP-210ENST00000557431 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 HTRA2O43464 458 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PRPSAP2O60256 369 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 RAD1O60671 282 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 LRCH4O75427 683 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PEX11BO96011 259 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PDHA1P08559 390 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PRKAR1AP10644 381 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 THRAP10827 490 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 FERP16591 822 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 CD82P27701 267 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 HTR7P34969 479 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 GPR1P46091 355 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 ATP1A2P50993 1020 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 POLE2P56282 527 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 SRSF1Q07955 248 aaKnown RBP eCLIP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 NSUN2Q08J23 767 aaKnown RBP eCLIP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 IGFBP7Q16270 282 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 FAM182AQ5T1J6 154 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 TXNRD3NBQ6F5E7 133 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PLEKHA7Q6IQ23 1121 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 NRSN1Q8IZ57 195 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 UNC5BQ8IZJ1 945 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 HSPH1Q92598 858 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 SCAMP4Q969E2 229 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 SEMA3CQ99985 751 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 EPN3Q9H201 632 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 ABCG8Q9H221 673 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 GEMIN8Q9NWZ8 242 aaKnown RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 TRNAU1APQ9NX07 287 aaKnown RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 SLC39A1Q9NY26 324 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 KCNK4Q9NYG8 393 aa14.04□□□□□ -0.16
SLIRP-210ENST00000557431 AKAP7Q9P0M2 348 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-210ENST00000557431 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms