RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 ILKAPQ9H0C8 392 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-220ENST00000557037 NDFIP2Q9NV92 336 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 GPR83Q9NYM4 423 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 B3GNT3Q9Y2A9 372 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-220ENST00000557037 STAB1Q9NY15 2570 aa12.46□□□□□ -0.42
PSEN1-220ENST00000557037 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.42
PSEN1-220ENST00000557037 BUB1O43683 1085 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 CUTAO60888 179 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 EML2O95834 649 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 GLI1P08151 1106 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 BPIP17213 487 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 GM2AP17900 193 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 FASLGP48023 281 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 NDST2P52849 883 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 GFERP55789 205 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 GEMIN4P57678 1058 aaKnown RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 RHOAP61586 193 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 CRB2Q5IJ48 1285 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 BRMS1LQ5PSV4 323 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 RRAGAQ7L523 313 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 SYVN1Q86TM6 617 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 NXPE1Q8N323 547 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 SEC14L1Q92503 715 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 INPP5DQ92835 1189 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 NT5C1BQ96P26 610 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 BARD1Q99728 777 aaKnown RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 FRMD8Q9BZ67 464 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 PHPT1Q9NRX4 125 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 HPCAL4Q9UM19 191 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-220ENST00000557037 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
PSEN1-220ENST00000557037 A8MX80 341 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 DAB1O75553 588 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 TMEM63AO94886 807 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-220ENST00000557037 TIAF1O95411 115 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 HTR1EP28566 365 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SULT1E1P49888 294 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 RALGDSQ12967 914 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 PEX6Q13608 980 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 ACOX1Q15067 660 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 KYNUQ16719 465 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SMTNL2Q2TAL5 461 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 CFAP58Q5T655 872 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SFRP1Q8N474 314 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
PSEN1-220ENST00000557037 TBC1D10AQ9BXI6 508 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 GPR87Q9BY21 358 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SUV39H2Q9H5I1 410 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 ACP6Q9NPH0 428 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 ASNSD1Q9NWL6 643 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 MFHAS1Q9Y4C4 1052 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
PSEN1-220ENST00000557037 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 TSPAN11A1L157 253 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 RASA4BC9J798 803 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 RASA4O43374 803 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 THAP12O43422 761 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 F9P00740 461 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 MT-ND3P03897 115 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 ELFN1P0C7U0 828 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 KRT5P13647 590 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 CD99P14209 185 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 CD1EP15812 388 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 ERCC5P28715 1186 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-220ENST00000557037 ETFBP38117 255 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 RPS15P62841 145 aaKnown RBP12.43□□□□□ -0.42
PSEN1-220ENST00000557037 HHEXQ03014 270 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 LAMB3Q13751 1172 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 IL11RAQ14626 422 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 VWA2Q5GFL6 755 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 LIPIQ6XZB0 460 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 PHLDB2Q86SQ0 1253 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 C9orf72Q96LT7 481 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 CPXM1Q96SM3 734 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 NPY6RQ99463 290 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
PSEN1-220ENST00000557037 ABCA4P78363 2273 aa12.42□□□□□ -0.42
PSEN1-220ENST00000557037 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
PSEN1-220ENST00000557037 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
PSEN1-220ENST00000557037 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms