RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NR0B2Q15466 257 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TCEA2Q15560 299 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 DNTTIP2Q5QJE6 756 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PERM1Q5SV97 790 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 LRRC66Q68CR7 880 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 SPOCD1Q6ZMY3 1216 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 Q6ZVL8 140 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 EFL1Q7Z2Z2 1120 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 HEATR4Q86WZ0 1026 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 RFX6Q8HWS3 928 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CCNYQ8ND76 341 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TADA1Q96BN2 335 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 NXPE2Q96DL1 559 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TRIB3Q96RU7 358 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TEX101Q9BY14 249 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CEP41Q9BYV8 373 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 FRMD8Q9BZ67 464 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 MRPL40Q9NQ50 206 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CLCA2Q9UQC9 943 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CHKBQ9Y259 395 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 ALG6Q9Y672 507 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA4Q13439 2230 aaKnown RBP10.31□□□□□ -0.76
SHMT2-224ENST00000556737 hCG_1818297A0A087WSY0 165 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PRSS38A1L453 326 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 USP27XA6NNY8 438 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PPP1R12AO14974 1030 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KRT86O43790 486 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 FUCA1P04066 466 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ANXA6P08133 673 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KRT10P13645 584 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 TNNT1P13805 278 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 JUPP14923 745 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-224ENST00000556737 TGM2P21980 687 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 CES1P23141 567 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 NFKBIAP25963 317 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 DUSP3P51452 185 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-224ENST00000556737 VAV2P52735 878 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 STC1P52823 247 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PDX1P52945 283 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 CDK3Q00526 305 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 E2F1Q01094 437 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PTSQ03393 145 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 DPTQ07507 201 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 CYP4F3Q08477 520 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KIF5AQ12840 1032 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 RTP5Q14D33 572 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PDK1Q15118 436 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ELOCQ15369 112 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 QPCTQ16769 361 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 B4GALNT4Q76KP1 1039 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 SFTPA2Q8IWL1 248 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KATNAL2Q8IYT4 538 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ARL10Q8N8L6 244 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 LPCAT1Q8NF37 534 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ATL2Q8NHH9 583 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 CCL4L1Q8NHW4 92 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KRT35Q92764 455 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 WDR24Q96S15 920 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 TSGA10Q9BZW7 698 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 BRD8Q9H0E9 1235 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ABCG8Q9H221 673 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 PCDH9Q9HC56 1237 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 EVA1BQ9NVM1 165 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 KCTD5Q9NXV2 234 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 NCKIPSDQ9NZQ3 722 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 SAE1Q9UBE0 346 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-224ENST00000556737 CD84Q9UIB8 345 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 GUCA1BQ9UMX6 200 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
SHMT2-224ENST00000556737 ASXL3Q9C0F0 2248 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 A0A1W2PNU3 283 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-224ENST00000556737 CPED1A4D0V7 1026 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 TNFRSF10CO14798 259 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 CEACAM5P06731 702 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 ZNF30P17039 623 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 CA4P22748 312 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 KELP23276 732 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 RPL26P61254 145 aaKnown RBP10.3□□□□□ -0.76
SHMT2-224ENST00000556737 AP1B1Q10567 949 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 ARHGEF7Q14155 803 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 SLC14A2Q15849 920 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 RAET1GQ6H3X3 334 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 LVRNQ6Q4G3 990 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 ADAMTSL4Q6UY14 1074 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 ZNF765Q7L2R6 523 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 RD3Q7Z3Z2 195 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 NRROSQ86YC3 692 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 SDR16C5Q8N3Y7 309 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 GPR156Q8NFN8 814 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 MAPK15Q8TD08 544 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 SCAMP4Q969E2 229 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 IMP4Q96G21 291 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms