RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 CCHCR1Q8TD31 782 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 HNRNPLLQ8WVV9 542 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 AP2M1Q96CW1 435 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PDXPQ96GD0 296 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 CALR3Q96L12 384 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 LGMNQ99538 433 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 CCDC3Q9BQI4 270 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 LGR4Q9BXB1 951 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 GSDMCQ9BYG8 508 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TMEM168Q9H0V1 697 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 CARS2Q9HA77 564 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 FGF22Q9HCT0 170 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 MRPL40Q9NQ50 206 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 LHX6Q9UPM6 363 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 A0A087WV48 116 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 C3orf70A6NLC5 250 aaPredicted RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 ANKRD66B4E2M5 251 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 BRINP1O60477 761 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 ZRANB2O95218 330 aaKnown RBP eCLIP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 CD86P42081 329 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 LSSP48449 732 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 HADHBP55084 474 aaKnown RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 GABREP78334 506 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 PTSQ03393 145 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 NIPAL4Q0D2K0 466 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 BIRC2Q13490 618 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 PERM1Q5SV97 790 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 CCDC70Q6NSX1 233 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 C19orf48Q6RUI8 117 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 CRTC1Q6UUV9 634 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 NT5DC3Q86UY8 548 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 RCOR2Q8IZ40 523 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 KYQ8NBH2 561 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 LPCAT1Q8NF37 534 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 LYSMD1Q96S90 227 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 MLPHQ9BV36 600 aaPredicted RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 DPEP2Q9H4A9 486 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 SYNDIG1Q9H7V2 258 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 TRNAU1APQ9NX07 287 aaKnown RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 PKD2L2Q9NZM6 624 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 SEPT10Q9P0V9 454 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 PCDHB1Q9Y5F3 818 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 PCDHA13Q9Y5I0 950 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 ALG6Q9Y672 507 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 USP24Q9UPU5 2620 aa10.77□□□□□ -0.69
XRCC3-216ENST00000556682 TDRD6O60522 2096 aaKnown RBP10.77□□□□□ -0.69
XRCC3-216ENST00000556682 IGF2RP11717 2491 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 A0A0A6YYK5 440 aaPredicted RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 C1orf232A0A0U1RR37 186 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 RGSL1A5PLK6 1076 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CAPN8A6NHC0 703 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 MTSS1O43312 755 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 LCA5LO95447 670 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CLDN7O95471 211 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 PRLP01236 227 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 MPOP05164 745 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CEACAM5P06731 702 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 PNLIPP16233 465 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 GLB1P16278 677 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 RBMS1P29558 406 aaKnown RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 TNNT3P45378 269 aaPredicted RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 ABCG1P45844 678 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 GNPDA1P46926 289 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 STC1P52823 247 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 DYNLT1P63172 113 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 TBC1D25Q3MII6 688 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 OGFOD3Q6PK18 319 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 MFSD7Q6UXD7 560 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 ADAMTSL4Q6UY14 1074 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 GPR156Q8NFN8 814 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 EXD1Q8NHP7 514 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 SNIP1Q8TAD8 396 aaKnown RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 TFB1MQ8WVM0 346 aaKnown RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CCDC74AQ96AQ1 378 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 HIC2Q96JB3 615 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 AGAP3Q96P47 875 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 OLFM3Q96PB7 478 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 PANX2Q96RD6 677 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 GFM1Q96RP9 751 aaKnown RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 SRPK1Q96SB4 655 aaKnown RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 FRMD8Q9BZ67 464 aaPredicted RBP10.76□□□□□ -0.69
XRCC3-216ENST00000556682 STRADBQ9C0K7 418 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CDH19Q9H159 772 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 SLC25A51Q9H1U9 297 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 ABCG8Q9H221 673 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 RAD18Q9NS91 495 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 CD84Q9UIB8 345 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 SLC17A4Q9Y2C5 497 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
XRCC3-216ENST00000556682 AKAP13Q12802 2813 aa10.75□□□□□ -0.69
XRCC3-216ENST00000556682 B4DGG1 531 aa10.75□□□□□ -0.69
XRCC3-216ENST00000556682 NTN3O00634 580 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms