RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TRIM24O15164 1050 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 KCNA5P22460 613 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 BCL2L1Q07817 233 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ACCSLQ4AC99 568 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 PREPLQ4J6C6 727 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 LCA5Q86VQ0 697 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 TTC30BQ8N4P2 665 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 C12orf76Q8N812 135 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ST13P5Q8NFI4 369 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 SCG3Q8WXD2 468 aaKnown RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 LBHD1Q9BQE6 289 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ALG9Q9H6U8 611 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 RIMKLBQ9ULI2 386 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 WNT6Q9Y6F9 365 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 XIRP2A4UGR9 3374 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 REV3LO60673 3130 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 GOLGA8CPA6NN73 597 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 OR1I1O60431 355 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 DIAPH2O60879 1101 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 NDUFS3O75489 264 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 PGLSO95336 258 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 SKIV2L2P42285 1042 aaKnown RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 AP1S1P61966 158 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ELF3P78545 371 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 C11orf91Q3C1V1 193 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ARL13AQ5H913 290 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 TECRLQ5HYJ1 363 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 RPS27LQ71UM5 84 aaKnown RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 RNF217Q8TC41 542 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 PIH1D2Q8WWB5 315 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 SLC7A6OSQ96CW6 309 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 UBXN10Q96LJ8 280 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 POMKQ9H5K3 350 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 ARHGEF3Q9NR81 526 aa18.29■□□□□ 0.52
SDR39U1-220ENST00000556548 CFAP73A6NFT4 308 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 SRCP12931 536 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 CEBPBP17676 345 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TFEBP19484 476 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 OGNP20774 298 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 KCNC1P48547 511 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 IDH3AP50213 366 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 PEX6Q13608 980 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 UBAP2LQ14157 1087 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 CYB5D1Q6P9G0 228 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 ADGRD2Q7Z7M1 963 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 NAT14Q8WUY8 206 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 N4BP2L2Q92802 583 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 EXT2Q93063 718 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 PHF21BQ96EK2 531 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 LMLNQ96KR4 655 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 MTIF3Q9H2K0 278 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 RWDD3Q9Y3V2 267 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 ZNF711Q9Y462 761 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TRANK1O15050 2925 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TMEM114B3SHH9 223 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 XYLBO75191 536 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 FDXRP22570 491 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 WEE1P30291 646 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 UBE3AQ05086 875 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TYSND1Q2T9J0 566 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 CFAP157Q5JU67 520 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 KLC3Q6P597 504 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TAS2R42Q7RTR8 314 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 TREML1Q86YW5 311 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 IRF7Q92985 503 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 DRC3Q9H069 523 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 CDH19Q9H159 772 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 COG4Q9H9E3 785 aa18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-220ENST00000556548 C5orf67F2Z3F1 127 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ZNF195O14628 629 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ZBTB14O43829 449 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ATP5HO75947 161 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 SRP72O76094 671 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 RHOBTB1O94844 696 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 IGSF6O95976 241 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 TYRP14679 529 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 CPA2P48052 419 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 RCN2Q14257 317 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 PRSS36Q5K4E3 855 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 LY6G5CQ5SRR4 150 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ITFG1Q8TB96 612 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 LPGAT1Q92604 370 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 AARSD1Q9BTE6 412 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ILKAPQ9H0C8 392 aaPredicted RBP18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 SAR1AQ9NR31 198 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 KLC4Q9NSK0 619 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 GALPQ9UBC7 116 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 SLCO3A1Q9UIG8 710 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 ZDHHC2Q9UIJ5 367 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 PKP3Q9Y446 797 aa18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-220ENST00000556548 A8MUI8 341 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 TRAFD1O14545 582 aaPredicted RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 H2AFYO75367 372 aaKnown RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 FGF19O95750 216 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 ENO1P06733 434 aaKnown RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 PFKLP17858 780 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 DDX6P26196 483 aaKnown RBP eCLIP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 KPNA2P52292 529 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms