RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FANCBQ8NB91 859 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SETD9Q8NE22 299 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 LRRC20Q8TCA0 184 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 AENQ8WTP8 325 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 TRUB1Q8WWH5 349 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 PSPC1Q8WXF1 523 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PLEKHA8Q96JA3 519 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DNAJC1Q96KC8 554 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 LURAP1Q96LR2 239 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DACH2Q96NX9 599 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KCNC2Q96PR1 638 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 QKIQ96PU8 341 aaKnown RBP eCLIP6.21□□□□□ -1.42
TDP1-215ENST00000556498 CRB3Q9BUF7 120 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KIFC1Q9BW19 673 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 TTLL2Q9BWV7 592 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 MRPS26Q9BYN8 205 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 TRIM54Q9BYV2 358 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ARHGAP39Q9C0H5 1083 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RACGAP1Q9H0H5 632 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 TP63Q9H3D4 680 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 MINDY3Q9H8M7 445 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ECT2Q9H8V3 914 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 COG4Q9H9E3 785 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 NMUR1Q9HB89 426 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 EPB41L5Q9HCM4 733 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 IFT46Q9NQC8 304 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CNNM1Q9NRU3 951 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RGS18Q9NS28 235 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FBXO28Q9NVF7 368 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DNAJC11Q9NVH1 559 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FAM120CQ9NX05 1096 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 GPRC5DQ9NZD1 345 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 AKAP7Q9P0M2 348 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 IGSF9Q9P2J2 1179 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CPNE7Q9UBL6 633 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ADD3Q9UEY8 706 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 AGO1Q9UL18 857 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ZFR2Q9UPR6 939 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 JAG2Q9Y219 1238 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 MFHAS1Q9Y4C4 1052 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 NPFFR2Q9Y5X5 522 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FGD6Q6ZV73 1430 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CLUHO75153 1309 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DAPK1P53355 1430 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 A0A0U1RQV5 110 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RNF103-CHMP3A0A140T963 221 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SLC15A5A6NIM6 579 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 OR6C75A6NL08 312 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 LRRC53A6NM62 1247 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 MEI4A8MW99 385 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF487B1APH4 448 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 NT5C1B-RDH14C9J2C7 533 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TFECO14948 347 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 PGRMC2O15173 223 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TO15178 435 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 VILLO15195 856 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 OPHN1O60890 802 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TADA2AO75478 443 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 NOL4O94818 638 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RHOBTB1O94844 696 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ABLIM3O94929 683 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 VNN1O95497 513 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CBX7O95931 251 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TGM6O95932 706 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TNNC2P02585 160 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 NTRK1P04629 796 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 SERPINA5P05154 406 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 TMIGD3P0DMS9 266 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 PKMP14618 531 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 CCNB1P14635 433 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CPEP16870 476 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TNNI1P19237 187 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TCN1P20061 433 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 GIFP27352 417 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 POU1F1P28069 291 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 RBL1P28749 1068 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 OXTRP30559 389 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ARCN1P48444 511 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 DHPSP49366 369 aaPredicted RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 MEOX2P50222 304 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CDK9P50750 372 aaKnown RBP6.2□□□□□ -1.42
TDP1-215ENST00000556498 NEK4P51957 841 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 HK2P52789 917 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 TAS2R60P59551 318 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 PSMC6P62333 389 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 IRX4P78413 519 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ABRQ12979 859 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
TDP1-215ENST00000556498 TMEM44Q2T9K0 475 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ZNF484Q5JVG2 852 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 AGBL2Q5U5Z8 902 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 DCAF15Q66K64 600 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 ANKRD40Q6AI12 368 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 HMBOX1Q6NT76 420 aa6.2□□□□□ -1.42
TDP1-215ENST00000556498 KLHDC10Q6PID8 442 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms