RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 USP46P62068 366 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PRELID2Q8N945 189 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PDPRQ8NCN5 879 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TMEM27Q9HBJ8 222 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 COMMD3-BMI1R4GMX3 469 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CASZ1Q86V15 1759 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ISM1B1AKI9 464 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 H3BM21 787 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TLL1O43897 1013 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 IL1BP01584 269 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TCF4P15884 667 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PIK3CBP42338 1070 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 SLC9A5Q14940 896 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 MIIPQ5JXC2 388 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CPTPQ5TA50 214 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 DOK6Q6PKX4 331 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PRR23BQ6ZRT6 265 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TDRPQ86YL5 185 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TTC29Q8NA56 475 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 OR10H5Q8NGA6 315 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF483Q8TF39 744 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 GPR20Q99678 358 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CMTM6Q9NX76 183 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ENO4A6NNW6 628 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 LYPLA1O75608 230 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 KRT33AO76009 404 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 AGR2O95994 175 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 IL10RBQ08334 325 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 DLG1Q12959 904 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 DHDDSQ86SQ9 333 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CLVS1Q8IUQ0 354 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PNPT1Q8TCS8 783 aaKnown RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 HM13Q8TCT9 377 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 WDR12Q9GZL7 423 aaKnown RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 INTS10Q9NVR2 710 aaKnown RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GLYATL1P3A0A0U1RQE8 302 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 DHRS12A0PJE2 317 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 UBXN7O94888 489 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 SCELO95171 688 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 MMP3P08254 477 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GAD2Q05329 585 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 ILF3Q12906 894 aaKnown RBP eCLIP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 C10orf62Q5T681 223 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 SLC25A24Q6NUK1 477 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 NIPAL1Q6NVV3 410 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 RTL4Q6ZR62 310 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 C16orf59Q7L2K0 433 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 RAVER1Q8IY67 606 aaKnown RBP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 C12orf50Q8NA57 414 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 MBOAT7Q96N66 472 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 QKIQ96PU8 341 aaKnown RBP eCLIP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 CKLFQ9UBR5 152 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 ADGRB2O60241 1585 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 SLC7A4O43246 635 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 REM1O75628 298 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GPIP06744 558 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 ARF4P18085 180 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 SOX11P35716 441 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 ACLYP53396 1101 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 RAB15P59190 212 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 STXBP1P61764 594 aaKnown RBP10.71□□□□□ -0.69
ACTN1-216ENST00000556083 ACAP2Q15057 778 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GPR33Q49SQ1 333 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GPAT3Q53EU6 434 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 TPGS1Q6ZTW0 290 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 NPAS4Q8IUM7 802 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 TMEM192Q8IY95 271 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 METTL21AQ8WXB1 218 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 HIPK3Q9H422 1215 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 SNX15Q9NRS6 342 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
ACTN1-216ENST00000556083 NID2Q14112 1375 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 PRORSD1PA6NEY8 169 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 H0YJX3 145 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 LIN7AO14910 233 aaPredicted RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 TLX3O43711 291 aaPredicted RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 STK16O75716 305 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 MC4RP32245 332 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 RPL4P36578 427 aaKnown RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 BST1Q10588 318 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 SULT1C3Q6IMI6 304 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 TRABD2AQ86V40 505 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 BHLHE22Q8NFJ8 381 aaPredicted RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 ADAMTS15Q8TE58 950 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 SLC44A1Q8WWI5 657 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 NR4A3Q92570 626 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 ACDQ96AP0 544 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 AKT1S1Q96B36 256 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 ROPN1LQ96C74 230 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 CHCHD6Q9BRQ6 235 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 C6orf62Q9GZU0 229 aaPredicted RBP10.71□□□□□ -0.7
ACTN1-216ENST00000556083 DNAJC28Q9NX36 388 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF624Q9P2J8 865 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms