RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 AMZ1Q400G9 498 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MANEAQ5SRI9 462 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 Q6ZVL8 140 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TECPR1Q7Z6L1 1165 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TSPAN33Q86UF1 283 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PIM3Q86V86 326 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ZDHHC1Q8WTX9 485 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 JPH3Q8WXH2 748 aaPredicted RBP14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NKD1Q969G9 470 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NUS1Q96E22 293 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CCDC74BQ96LY2 380 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MCCC1Q96RQ3 725 aaPredicted RBP14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SPRY4Q9C004 299 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SP110Q9HB58 689 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NOD2Q9HC29 1040 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 WDR70Q9NW82 654 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SEPT3Q9UH03 358 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PPIL1Q9Y3C6 166 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PCDHGA3Q9Y5H0 932 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IGHV1OR21-1A0A087WYE8 117 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TMCO5BA8MYB1 307 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 HGSO14964 777 aaPredicted RBP14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SOCS5O75159 536 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 EML2O95834 649 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 FERP16591 822 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TEAD1P28347 426 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ALDH4A1P30038 563 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 VIPR1P32241 457 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ADCY8P40145 1251 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 LIMK2P53671 638 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MAP9Q49MG5 647 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PPP6R3Q5H9R7 873 aaPredicted RBP14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TMCO4Q5TGY1 634 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 NKAIN2Q5VXU1 208 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PSTKQ8IV42 348 aaKnown RBP14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 BMPERQ8N8U9 685 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 KIAA1524Q8TCG1 905 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 FNIP1Q8TF40 1166 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ZNF599Q96NL3 588 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 NUDCD1Q96RS6 583 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MGME1Q9BQP7 344 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SUDS3Q9H7L9 328 aaPredicted RBP14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PARVAQ9NVD7 372 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MOSPD1Q9UJG1 213 aa14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 UTP20O75691 2785 aaKnown RBP14.33□□□□□ -0.12
CHMP4BP1-201ENST00000556017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 FZD6O60353 706 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 IVLP07476 585 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PDHA1P08559 390 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 AMPD1P23109 780 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 CD82P27701 267 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 GPR3P46089 330 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 GNPDA1P46926 289 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MAXP61244 160 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MYL5Q02045 173 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 DPTQ07507 201 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SRSF1Q07955 248 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 DPYSL2Q16555 572 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 CLPPQ16740 277 aaPredicted RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ZNF571Q7Z3V5 609 aaPredicted RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 POLNQ7Z5Q5 900 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PIH1D2Q8WWB5 315 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SCRN2Q96FV2 425 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PCMTD1Q96MG8 357 aaPredicted RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PHPT1Q9NRX4 125 aaPredicted RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 GEMIN8Q9NWZ8 242 aaKnown RBP14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PDP2Q9P2J9 529 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 B3GALT1Q9Y5Z6 326 aa14.32□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 DAPK3O43293 454 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PGLSO95336 258 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 CPP00450 1065 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 THRAP10827 490 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MPSTP25325 297 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 UGT1A3P35503 534 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 RENBPP51606 427 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ILF3Q12906 894 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 DENND2CQ68D51 928 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 LZTR1Q8N653 840 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 OR4D9Q8NGE8 314 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 TAAR9Q96RI9 348 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 AGAP2Q99490 1192 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ABCG8Q9H221 673 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 OCIAD1Q9NX40 245 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 SEPT10Q9P0V9 454 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 MYO6Q9UM54 1294 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 PHTF1Q9UMS5 762 aa14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 USP9XQ93008 2570 aaPredicted RBP14.31□□□□□ -0.12
CHMP4BP1-201ENST00000556017 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
CHMP4BP1-201ENST00000556017 LRRC53A6NM62 1247 aa14.3□□□□□ -0.12
CHMP4BP1-201ENST00000556017 RHPN2P1A8MT19 583 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms