RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C6P13671 934 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 PGAM1P18669 254 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ELK3P41970 407 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 MAGEA4P43358 317 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF140P52738 457 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 CRADDP78560 199 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ACVR1Q04771 509 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ANKRD20A4Q4UJ75 823 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 KIAA0895LQ68EN5 471 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 Q6ZVL8 140 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF765Q7L2R6 523 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 HSD11B1LQ7Z5J1 315 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 MPP5Q8N3R9 675 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 MYRIPQ8NFW9 859 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 OR4K2Q8NGD2 314 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 PYROXD1Q8WU10 500 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 LENG8Q96PV6 779 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 PLEKHG4BQ96PX9 1271 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 PRRX2Q99811 253 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 GPR174Q9BXC1 333 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 SAYSD1Q9NPB0 183 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 NLE1Q9NVX2 485 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 NFKBIL1Q9UBC1 381 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ZC3H7BQ9UGR2 993 aaKnown RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 MBD1Q9UIS9 605 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 APPL1Q9UKG1 709 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 ZFR2Q9UPR6 939 aaKnown RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 A0A0U1RQS6 177 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 H7C0S8 307 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 RPP40O75818 363 aaKnown RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 USP1O94782 785 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PYGLP06737 847 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 GSTA2P09210 222 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 TSHRP16473 764 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 BPIP17213 487 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PAMP19021 973 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 ETV3P41162 512 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 DCDC1P59894 354 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 VSNL1P62760 191 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 DPTQ07507 201 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 MTM1Q13496 603 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 FRG1Q14331 258 aaKnown RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 SEL1L3Q68CR1 1132 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 CYS1Q717R9 158 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 CCDC25Q86WR0 208 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PALM2Q8IXS6 379 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 ZBED8Q8IZ13 594 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 FRMD1Q8N878 549 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 FBXO36Q8NEA4 188 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 DTD2Q96FN9 168 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 CDKN2AIPNLQ96HQ2 116 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 SGSM3Q96HU1 749 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 LRFN3Q9BTN0 628 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 DUSP15Q9H1R2 295 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 C6orf106Q9H6K1 298 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-221ENST00000555773 TREX1Q9NSU2 369 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 DMTF1Q9Y222 760 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 INVSQ9Y283 1065 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PCDHGA2Q9Y5H1 932 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 FAM169AQ9Y6X4 670 aa12.44□□□□□ -0.42
SHMT2-221ENST00000555773 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 BUD23O43709 281 aaKnown RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 FSBPO95073 299 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 GM2AP17900 193 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 SPAM1P38567 509 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 RPL6Q02878 288 aaKnown RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 LRRC14Q15048 493 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 SPANXN3Q5MJ09 141 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 PDPK2PQ6A1A2 396 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 ESRP1Q6NXG1 681 aaKnown RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 LPCAT2Q7L5N7 544 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 ANKMY2Q8IV38 441 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 IGDCC3Q8IVU1 814 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 GPR26Q8NDV2 337 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 DENND6BQ8NEG7 585 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 OR13C4Q8NGS5 318 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 OR13J1Q8NGT2 312 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 CENPTQ96BT3 561 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 NUS1Q96E22 293 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 MFSD3Q96ES6 412 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 DNAJC1Q96KC8 554 aaKnown RBP12.43□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF778Q96MU6 729 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 TTC25Q96NG3 672 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 ABCG8Q9H221 673 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 BPIFA1Q9NP55 256 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 IL26Q9NPH9 171 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
SHMT2-221ENST00000555773 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms