RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GLMNQ92990 594 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 FUBP1Q96AE4 644 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 AP2M1Q96CW1 435 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 DTD2Q96FN9 168 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PDXPQ96GD0 296 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ADGRE3Q9BY15 652 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CYP4F12Q9HCS2 524 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 KLHL8Q9P2G9 620 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GULP1Q9UBP9 304 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 AMFRQ9UKV5 643 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 DNPEPQ9ULA0 475 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PNMA8BQ9ULN7 279 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 C1orf232A0A0U1RR37 186 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CCDC66A2RUB6 948 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TMEM202A6NGA9 273 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CAPN8A6NHC0 703 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 BTNL10A8MVZ5 291 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 LMO7DNF2Z398 122 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 MTSS1O43312 755 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 FZD6O60353 706 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PMPCBO75439 489 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 DKK1O94907 266 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CLDN7O95471 211 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 SLC4A1P02730 911 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PROS1P07225 676 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CELA2BP08218 269 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 MMP2P08253 660 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 GIMD1P0DJR0 217 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 MYCLP1P12525 358 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CKMT1AP12532 417 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ZNF30P17039 623 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ACP1P24666 158 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PTPN3P26045 913 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TNNT3P45378 269 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 RPIAP49247 311 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 RWDD2BP57060 319 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 GSDMDP57764 484 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 RPL26P61254 145 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 E2F1Q01094 437 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ADCY2Q08462 1091 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ILKQ13418 452 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PRKD1Q15139 912 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 SMAD1Q15797 465 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PPP2R5EQ16537 467 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TAZQ16635 292 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 QPCTQ16769 361 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TEX44Q53QW1 395 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 HES3Q5TGS1 186 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 DOK6Q6PKX4 331 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CCNI2Q6ZMN8 369 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 RFLNAQ6ZTI6 216 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TAF8Q7Z7C8 310 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TMPRSS12Q86WS5 348 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 GKN2Q86XP6 184 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TMEM139Q8IV31 216 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PELI3Q8N2H9 469 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 OR1E3Q8WZA6 343 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 IMP4Q96G21 291 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 FERMT1Q9BQL6 677 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 LGR4Q9BXB1 951 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 CLPBQ9H078 707 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ABCG4Q9H172 646 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 SLC25A51Q9H1U9 297 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 ABCG8Q9H221 673 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 GLOD4Q9HC38 313 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 FGF22Q9HCT0 170 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 MRPL40Q9NQ50 206 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 UBP1Q9NZI7 540 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 SIRPGQ9P1W8 387 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 TRIM10Q9UDY6 481 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 RPL26L1Q9UNX3 145 aaKnown RBP10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PPIL1Q9Y3C6 166 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 PIKFYVEQ9Y2I7 2098 aa10.65□□□□□ -0.7
SHMT2-213ENST00000554600 GRID2IPA4D2P6 1211 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 FAM221BA6H8Z2 402 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 TMEM8BA6NDV4 472 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 ANKRD66B4E2M5 251 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 TPP1O14773 563 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 YY2O15391 372 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 FTCDO95954 541 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 MT-CYBP00156 380 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-213ENST00000554600 PRLP01236 227 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 PIRTP0C851 137 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 NFKB1P19838 968 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 TRIM23P36406 574 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 STC1P52823 247 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 COPS2P61201 443 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 PTSQ03393 145 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 NR0B2Q15466 257 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 BBS12Q6ZW61 710 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 PID1Q7Z2X4 250 aa10.64□□□□□ -0.71
SHMT2-213ENST00000554600 EFL1Q7Z2Z2 1120 aaKnown RBP10.64□□□□□ -0.71
SHMT2-213ENST00000554600 SYCE1Q8N0S2 351 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms