RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 TMEM44Q2T9K0 475 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 MARCH8Q5T0T0 291 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 C6orf52Q5T4I8 152 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 SLFN12LQ6IEE8 588 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ZNF782Q6ZMW2 699 aaPredicted RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ATG14Q6ZNE5 492 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 CFAP77Q6ZQR2 320 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ANKS3Q6ZW76 656 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 LYSMD2Q8IV50 215 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 CTAGE3PQ8IX95 158 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 SYCE1Q8N0S2 351 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 PRR18Q8N4B5 295 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 C12orf29Q8N999 325 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 LRRC57Q8N9N7 239 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 TP53I13Q8NBR0 393 aaPredicted RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 PHF10Q8WUB8 498 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 SDR42E1Q8WUS8 393 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ART4Q93070 314 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.59□□□□□ -1.038e-7■■■■■ 34
HNRNPC-211ENST00000554455 NTAN1Q96AB6 310 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 TUBGCP3Q96CW5 907 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ZHX1-C8orf76Q96EF9 292 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 PGAP3Q96FM1 320 aaPredicted RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 MAGED4Q96JG8 741 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 C9orf72Q96LT7 481 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 CCDC17Q96LX7 622 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 KLHL15Q96M94 604 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 PAPOLGQ9BWT3 736 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 KCNH6Q9H252 994 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 COPG2Q9UBF2 871 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ARPP21Q9UBL0 812 aaPredicted RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 EPHA6Q9UF33 1036 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 SRP68Q9UHB9 627 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 LIPT1Q9Y234 373 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 NDUFAF1Q9Y375 327 aa8.59□□□□□ -1.03
HNRNPC-211ENST00000554455 ZNF831Q5JPB2 1677 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PDZK1P1A8MUH7 402 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 I3L521 148 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 NDUFS8O00217 210 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PSMA7O14818 248 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SYN3O14994 580 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 KLRC4O43908 158 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PIP5K1CO60331 668 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 FTCDO95954 541 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CYP11A1P05108 521 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 S100A8P05109 93 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 H2AFB2P0C5Z0 115 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CYP2D6P10635 497 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 BMP2P12643 396 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TNFAIP3P21580 790 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 GRIA3P42263 894 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 RPIAP49247 311 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ERFP50548 548 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SLC7A2P52569 658 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 RGS1Q08116 209 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PPIL2Q13356 520 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 MINDY4Q4G0A6 757 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CCNYL2Q5T2Q4 361 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 FAM171A1Q5VUB5 890 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 IRAK1BP1Q5VVH5 260 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 GPR107Q5VW38 600 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 MZT2BQ6NZ67 158 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PKN3Q6P5Z2 889 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CATSPER3Q86XQ3 398 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 JAMLQ86YT9 394 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TIGD4Q8IY51 512 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 BLIDQ8IZY5 108 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ZNF527Q8NB42 609 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CPNE4Q96A23 557 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 NEU1Q99519 415 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TMEM121Q9BTD3 319 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SHARPINQ9H0F6 387 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 BLZF1Q9H2G9 400 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 RHBGQ9H310 441 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SUV39H2Q9H5I1 410 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 MLXIPLQ9NP71 852 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ABCD2Q9UBJ2 740 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SLC27A5Q9Y2P5 690 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 PRSS51A0A1B0GVH4 220 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 FAM221BA6H8Z2 402 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TRABD2BA6NFA1 517 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TUBAL3A6NHL2 446 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 M0R2N6 131 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 CALUO43852 315 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 SYNCRIPO60506 623 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 TRIM3O75382 744 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 FAM13AO94988 1023 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 IL33O95760 270 aa8.58□□□□□ -1.04
HNRNPC-211ENST00000554455 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms