RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RPIAP49247 311 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 NDST2P52849 883 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 PFN3P60673 137 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 DRICH1Q6PGQ1 229 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 IGF2-ASQ6U949 168 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 ARHGAP36Q6ZRI8 547 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 B4GALNT4Q76KP1 1039 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 LZTR1Q8N653 840 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 LRRN4Q8WUT4 740 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 TTC9Q92623 222 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 P3H4Q92791 437 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 RAB7BQ96AH8 199 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 GRAMD1AQ96CP6 724 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 HMCESQ96FZ2 354 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 FRMD8P1Q9BZ68 369 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 TCEAL2Q9H3H9 227 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 C10orf88Q9H8K7 445 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 PCDHGA8Q9Y5G5 932 aa14.09□□□□□ -0.15
SPTLC2-202ENST00000554365 TRPM6Q9BX84 2022 aa14.08□□□□□ -0.15
SPTLC2-202ENST00000554365 RASA4BC9J798 803 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 CCDC188H7C350 402 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PYCARD-AS1I3L0S3 204 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 TPP1O14773 563 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 CASC3O15234 703 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 RASA4O43374 803 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 GCATO75600 419 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 TCEA3O75764 348 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 C6P13671 934 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 SERPINB6P35237 376 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 COILP38432 576 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 KCNJ1P48048 391 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 EIF3EP60228 445 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 XRCC4Q13426 336 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 SNX1Q13596 522 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PRKD1Q15139 912 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 ZNF805Q5CZA5 627 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PRRT3Q5FWE3 981 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 LRRC73Q5JTD7 316 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 FAXCQ5TGI0 409 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 KIAA1614Q5VZ46 1190 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 LEKR1Q6ZMV7 388 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 SLC35F3Q8IY50 421 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PHACTR4Q8IZ21 702 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 ARL14Q8N4G2 192 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 CEP112Q8N8E3 955 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 DENND6BQ8NEG7 585 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 MAGOHBQ96A72 148 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 ISG20Q96AZ6 181 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 PRR11Q96HE9 360 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 QKIQ96PU8 341 aaKnown RBP eCLIP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 LRRC61Q9BV99 259 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 DDX47Q9H0S4 455 aaKnown RBP14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 ATMQ13315 3056 aa14.08□□□□□ -0.16
SPTLC2-202ENST00000554365 GOLGA6L10A0A0M3HER8 536 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CTAGE15A4D2H0 777 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 B8ZZF3 427 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 K7ENP7 123 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 RAMP2O60895 175 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 TNFSF15O95150 251 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CD160O95971 181 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 UGT2B4P06133 528 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 ANXA6P08133 673 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CTAGE8P0CG41 777 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 RBP3P10745 1247 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 IGFALSP35858 605 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 ETFBP38117 255 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 GARSP41250 739 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 FNTAP49354 379 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 PAPOLAP51003 745 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 YBEYP58557 167 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 SPIDRQ14159 915 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 KCTD19Q17RG1 926 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 PARP15Q460N3 678 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 C6orf132Q5T0Z8 1188 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 INO80CQ6PI98 192 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CCDC81Q6ZN84 652 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CTAGE6Q86UF2 777 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 ZC3H18Q86VM9 953 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CTAGE4Q8IX94 777 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 PLPP6Q8IY26 295 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 MMGT1Q8N4V1 131 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 NOA1Q8NC60 698 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 OR2AP1Q8NGE2 309 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 WDR36Q8NI36 951 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 SNRNP27Q8WVK2 155 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 ASB12Q8WXK4 309 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 NAT6Q93015 286 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 KLHL32Q96NJ5 620 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 TSGA13Q96PP4 275 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 CCDC3Q9BQI4 270 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 BOCQ9BWV1 1114 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 MAGEH1Q9H213 219 aa14.07□□□□□ -0.16
SPTLC2-202ENST00000554365 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms