RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 OSBPL2Q9H1P3 480 aa16.13■□□□□ 0.17
ACTN1-209ENST00000553659 WDCPQ9H6R7 721 aa16.13■□□□□ 0.17
ACTN1-209ENST00000553659 SENP1Q9P0U3 644 aa16.13■□□□□ 0.17
ACTN1-209ENST00000553659 SYNJ2BP-COX16A0A087WUM0 186 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 RNGTTO60942 597 aaKnown RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 GSTA2P09210 222 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 TPSB2P20231 275 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 MMP13P45452 471 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 TPI1P60174 286 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 CDK16Q00536 496 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 PDIA2Q13087 525 aaKnown RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 ZNF177Q13360 481 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 DPYSQ14117 519 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 TPSAB1Q15661 275 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 PROX2Q3B8N5 592 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 ACBD5Q5T8D3 534 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 ZBED8Q8IZ13 594 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 OR52K2Q8NGK3 314 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 EPS8L3Q8TE67 593 aaKnown RBP16.12■□□□□ 0.17
ACTN1-209ENST00000553659 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 KLHDC7BQ96G42 594 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 C9orf72Q96LT7 481 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 PRORYQ9H606 182 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 PREBQ9HCU5 417 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 DTLQ9NZJ0 730 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 COX16Q9P0S2 106 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 OR51B4Q9Y5P0 310 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 TRPM6Q9BX84 2022 aa16.12■□□□□ 0.17
ACTN1-209ENST00000553659 DOCK4Q8N1I0 1966 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 EXOC1LA0A1B0GW35 172 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 TK2O00142 265 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 AMPD1P23109 780 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 GLDCP23378 1020 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 ATP1A2P50993 1020 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 E2F1Q01094 437 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 GBE1Q04446 702 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 KCTD19Q17RG1 926 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-209ENST00000553659 POM121L1PQ3SYA9 428 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 C5orf22Q49AR2 442 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 CCDC38Q502W7 563 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 ARHGEF18Q6ZSZ5 1173 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 Q6ZVU0 165 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 SNIP1Q8TAD8 396 aaKnown RBP16.11■□□□□ 0.17
ACTN1-209ENST00000553659 HTR3CQ8WXA8 447 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 HAPLN3Q96S86 360 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 VPS37BQ9H9H4 285 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 EIF2B3Q9NR50 452 aaKnown RBP16.11■□□□□ 0.17
ACTN1-209ENST00000553659 RAB6BQ9NRW1 208 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 ETNK2Q9NVF9 386 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 VPS28Q9UK41 221 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 VANGL2Q9ULK5 521 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 CLCA2Q9UQC9 943 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 TBC1D30Q9Y2I9 924 aa16.11■□□□□ 0.17
ACTN1-209ENST00000553659 TRIM38O00635 465 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 SIGLEC6O43699 453 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 CREB3O43889 395 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 SDC3O75056 442 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 CLDN11O75508 207 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 LSP1P33241 339 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 TAS2R38P59533 333 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 INSM1Q01101 510 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-209ENST00000553659 CCDC15Q0P6D6 951 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 C19orf57Q0VDD7 668 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 PRKD1Q15139 912 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-209ENST00000553659 LONRF1Q17RB8 773 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 NEK5Q6P3R8 708 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 PALM2Q8IXS6 379 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 SLC25A45Q8N413 288 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 DCBLD1Q8N8Z6 715 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 TMEM145Q8NBT3 493 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 FGF11Q92914 225 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 XAB2Q9HCS7 855 aaKnown RBP16.1■□□□□ 0.17
ACTN1-209ENST00000553659 ARHGEF38Q9NXL2 777 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 DONSONQ9NYP3 566 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 HS3ST2Q9Y278 367 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 CA5BQ9Y2D0 317 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 RAI2Q9Y5P3 530 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 HS3ST4Q9Y661 456 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 PTPRQQ9UMZ3 2332 aa16.1■□□□□ 0.17
ACTN1-209ENST00000553659 SMIM23A6NLE4 172 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 ATXN7O15265 892 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-209ENST00000553659 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-209ENST00000553659 BNIP3LO60238 219 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 BRINP1O60477 761 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 PAGE1O75459 146 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 TMEM63AO94886 807 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 MLNP12872 115 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 CDH4P55283 916 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 NRG1Q02297 640 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-209ENST00000553659 SEMA5AQ13591 1074 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 ZSCAN26Q16670 478 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 PIP5KL1Q5T9C9 394 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 ANKRD22Q5VYY1 191 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 PYROXD2Q8N2H3 581 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 LZTR1Q8N653 840 aa16.09■□□□□ 0.17
ACTN1-209ENST00000553659 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
ACTN1-209ENST00000553659 SLC39A7Q92504 469 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms