RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 ABCD1P33897 745 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 ACSM2AQ08AH3 577 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 FOXD4Q12950 439 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-205ENST00000553508 ZNF628Q5EBL2 1059 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 KRBA2Q6ZNG9 492 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 QSOX2Q6ZRP7 698 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 ZNF771Q7L3S4 317 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-205ENST00000553508 SPATA6LQ8N4H0 392 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 EPYCQ99645 322 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 EIF2AK1Q9BQI3 630 aaKnown RBP6.53□□□□□ -1.36
PCNX1-205ENST00000553508 EVA1AQ9H8M9 152 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 HINT3Q9NQE9 182 aaKnown RBP6.53□□□□□ -1.36
PCNX1-205ENST00000553508 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 ERVK-11Q9UQG0 969 aa6.53□□□□□ -1.36
PCNX1-205ENST00000553508 LRRC53A6NM62 1247 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 ZNF587BE7ETH6 402 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 XPNPEP2O43895 674 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 RFPL2O75678 378 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 F9P00740 461 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 IGLV2-11P01706 119 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 DGKAP23743 735 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 METAP2P50579 478 aaKnown RBP eCLIP6.52□□□□□ -1.37
PCNX1-205ENST00000553508 ZNF132P52740 706 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 SLC20A2Q08357 652 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 PRICKLE4Q2TBC4 344 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 C9orf139Q6ZV77 190 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 ZNF329Q86UD4 541 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 ODF3L1Q8IXM7 274 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 NAGSQ8N159 534 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 MAB21L3Q8N8X9 362 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 NODALQ96S42 347 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 PPP1R3EQ9H7J1 279 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 TTC7AQ9ULT0 858 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-205ENST00000553508 NAALADL1Q9UQQ1 740 aa6.52□□□□□ -1.37
PCNX1-205ENST00000553508 GREB1LQ9C091 1923 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-205ENST00000553508 PDS5AQ29RF7 1337 aaKnown RBP6.51□□□□□ -1.37
PCNX1-205ENST00000553508 MAPKBP1O60336 1514 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 TTC36A6NLP5 189 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 GABRB2P47870 512 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 HARS2P49590 506 aaKnown RBP6.51□□□□□ -1.37
PCNX1-205ENST00000553508 ILF3Q12906 894 aaKnown RBP eCLIP6.51□□□□□ -1.37
PCNX1-205ENST00000553508 PTP4A2Q12974 167 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 ZRSR1Q15695 479 aaKnown RBP6.51□□□□□ -1.37
PCNX1-205ENST00000553508 CCDC13Q8IYE1 715 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 EXOC8Q8IYI6 725 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 CNTROBQ8N137 903 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 ZUFSPQ96AP4 578 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 SAAL1Q96ER3 474 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 UBTD1Q9HAC8 227 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 SLC6A13Q9NSD5 602 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 AAR2Q9Y312 384 aaKnown RBP6.51□□□□□ -1.37
PCNX1-205ENST00000553508 CEPT1Q9Y6K0 416 aa6.51□□□□□ -1.37
PCNX1-205ENST00000553508 KIAA0586Q9BVV6 1533 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 A6NLC8 198 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 NPHP1O15259 732 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 TNFSF14O43557 240 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 LMX1BO60663 402 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 AGR2O95994 175 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 MAOAP21397 527 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 KCNA5P22460 613 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 CPOXP36551 454 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
PCNX1-205ENST00000553508 ARL16Q0P5N6 197 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 FGFBP1Q14512 234 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 GSTA3Q16772 222 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 ALG11Q2TAA5 492 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 IRAK1BP1Q5VVH5 260 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 METTL2BQ6P1Q9 378 aaKnown RBP6.5□□□□□ -1.37
PCNX1-205ENST00000553508 FAM122CQ6P4D5 195 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 USP43Q70EL4 1123 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 MUC20Q8N307 709 aaPredicted RBP6.5□□□□□ -1.37
PCNX1-205ENST00000553508 SPATA3Q8NHX4 192 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 NFKBIDQ8NI38 313 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 DUSP19Q8WTR2 217 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 METTL2AQ96IZ6 378 aaKnown RBP6.5□□□□□ -1.37
PCNX1-205ENST00000553508 CMKLR1Q99788 373 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 USP44Q9H0E7 712 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 EBF2Q9HAK2 575 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 KIF9Q9HAQ2 790 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 PDP2Q9P2J9 529 aa6.5□□□□□ -1.37
PCNX1-205ENST00000553508 ABCC10Q5T3U5 1492 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 KIF13AQ9H1H9 1805 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 A0A1W2PQM1 296 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 BMPR1BO00238 502 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 TAF4O00268 1085 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 BDKRB2P30411 391 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 TMPOP42166 694 aaKnown RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 RELQ04864 619 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 DRAP1Q14919 205 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 GPATCH4Q5T3I0 446 aaKnown RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 KCTD18Q6PI47 426 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 CHERPQ8IWX8 916 aaKnown RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 ZNF34Q8IZ26 560 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 KCNH5Q8NCM2 988 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 OR2AK2Q8NG84 335 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 SLC20A1Q8WUM9 679 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 PPM1EQ8WY54 764 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 SLC41A2Q96JW4 573 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms