RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 GPR1P46091 355 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 GNPDA1P46926 289 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 DYNLT1P63172 113 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 NIPAL4Q0D2K0 466 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 AP1B1Q10567 949 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 IHHQ14623 411 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 TBC1D25Q3MII6 688 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 NPNTQ6UXI9 565 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 SFTPA2Q8IWL1 248 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 SDR16C5Q8N3Y7 309 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 Q8N9G6 341 aaPredicted RBP17.9■□□□□ 0.46
PNN-202ENST00000553331 PANX2Q96RD6 677 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 MCCC1Q96RQ3 725 aaPredicted RBP17.9■□□□□ 0.46
PNN-202ENST00000553331 DPEP2Q9H4A9 486 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 KCTD5Q9NXV2 234 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 SEPT10Q9P0V9 454 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 RABGEF1Q9UJ41 708 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 ENTPD2Q9Y5L3 495 aa17.9■□□□□ 0.46
PNN-202ENST00000553331 COL27A1Q8IZC6 1860 aaPredicted RBP17.9■□□□□ 0.46
PNN-202ENST00000553331 A0A0J9YYE9 177 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 FZD6O60353 706 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 TRBC1P01850 177 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CA4P22748 312 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CD86P42081 329 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 NOP2P46087 812 aaKnown RBP17.89■□□□□ 0.45
PNN-202ENST00000553331 POLD2P49005 469 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CCL7P80098 99 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CDK3Q00526 305 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 B4GALNT4Q76KP1 1039 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CBARPQ8N350 705 aaPredicted RBP17.89■□□□□ 0.45
PNN-202ENST00000553331 PLD5Q8N7P1 536 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 ARRDC2Q8TBH0 407 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 AP2M1Q96CW1 435 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 HDAC11Q96DB2 347 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 TDRD1Q9BXT4 1180 aaKnown RBP17.89■□□□□ 0.45
PNN-202ENST00000553331 TEX101Q9BY14 249 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 CEP41Q9BYV8 373 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 ABCG8Q9H221 673 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 POLR1BQ9H9Y6 1135 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 PCDH9Q9HC56 1237 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 PPIL1Q9Y3C6 166 aa17.89■□□□□ 0.45
PNN-202ENST00000553331 C3orf70A6NLC5 250 aaPredicted RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 AGRPO00253 132 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 SPOPO43791 374 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 TCEA3O75764 348 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 MTA2O94776 668 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 LCA5LO95447 670 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 RPLP0P05388 317 aaKnown RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 CEACAM5P06731 702 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 COMTP21964 271 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 LSSP48449 732 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 PTSQ03393 145 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 PPIDQ08752 370 aaKnown RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 ZBTB17Q13105 803 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 LLGL1Q15334 1064 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 KIF26BQ2KJY2 2108 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 ALG1LQ6GMV1 187 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 TECPR1Q7Z6L1 1165 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 SNIP1Q8TAD8 396 aaKnown RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 PTCD2Q8WV60 388 aaKnown RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 SCAMP4Q969E2 229 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 FATE1Q969F0 183 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 GFM1Q96RP9 751 aaKnown RBP17.88■□□□□ 0.45
PNN-202ENST00000553331 AMACRQ9UHK6 382 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 SUFUQ9UMX1 484 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 TMEM98Q9Y2Y6 226 aa17.88■□□□□ 0.45
PNN-202ENST00000553331 CLDN7O95471 211 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 PRLP01236 227 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 HOXB3P14651 431 aaPredicted RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 RBMS1P29558 406 aaKnown RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 MAGEA1P43355 309 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 MARK2Q7KZI7 788 aaKnown RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 TRIM74Q86UV6 250 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 RHOT1Q8IXI2 618 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 LSMEM2Q8N112 164 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 GPR156Q8NFN8 814 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 WDR48Q8TAF3 677 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 ZNF578Q96N58 590 aaPredicted RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 FRMD8Q9BZ67 464 aaPredicted RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 DDX56Q9NY93 547 aaKnown RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 IMPACTQ9P2X3 320 aa17.87■□□□□ 0.45
PNN-202ENST00000553331 ANKRD11Q6UB99 2663 aaPredicted RBP17.87■□□□□ 0.45
PNN-202ENST00000553331 ARHGEF17Q96PE2 2063 aaPredicted RBP17.86■□□□□ 0.45
PNN-202ENST00000553331 C1orf232A0A0U1RR37 186 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 A0A1W2PNU3 283 aaPredicted RBP17.86■□□□□ 0.45
PNN-202ENST00000553331 PMS2P1A4D2B8 440 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 CAPN8A6NHC0 703 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 INPP4BO15327 924 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 NOBOXO60393 691 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 FUCA1P04066 466 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 ZNF30P17039 623 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 AK4P27144 223 aaPredicted RBP17.86■□□□□ 0.45
PNN-202ENST00000553331 SLC1A1P43005 524 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 STC1P52823 247 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 PCBP4P57723 403 aaKnown RBP17.86■□□□□ 0.45
PNN-202ENST00000553331 SKOR1P84550 965 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 DPTQ07507 201 aa17.86■□□□□ 0.45
PNN-202ENST00000553331 ILF3Q12906 894 aaKnown RBP eCLIP17.86■□□□□ 0.455e-8■■□□□ 13.9
PNN-202ENST00000553331 PDK1Q15118 436 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms