RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ZNF700Q9H0M5 742 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 RIPK3Q9Y572 518 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 PCDHA10Q9Y5I2 948 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 NLRC5Q86WI3 1866 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 CNOT1A5YKK6 2376 aaKnown RBP5.21□□□□□ -1.57
ATXN3-218ENST00000553309 SRRM3A6NNA2 597 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SLC38A8A6NNN8 435 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 C2CD4DB7Z1M9 353 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 EYA2O00167 538 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 TAF4O00268 1085 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 EPB41L2O43491 1005 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 CXCL10P02778 98 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 LDHCP07864 332 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SP9P0CG40 484 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 TBXAS1P24557 533 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 DNAJB1P25685 340 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 CCKARP32238 428 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 POLD2P49005 469 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 ADPRHP54922 357 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 GSTO1P78417 241 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 CNTN2Q02246 1040 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 CAMK1Q14012 370 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 PTGISQ16647 500 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SOWAHCQ53LP3 525 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SPECC1Q5M775 1068 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 C1QTNF12Q5T7M4 302 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SNRNP48Q6IEG0 339 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 ERAP2Q6P179 960 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 TATDN1Q6P1N9 297 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 LVRNQ6Q4G3 990 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 MDGA2Q7Z553 956 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 CREBRFQ8IUR6 639 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 PELI3Q8N2H9 469 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 VN1R2Q8NFZ6 395 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 AFAP1L1Q8TED9 768 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SUSD6Q92537 303 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 EID2BQ96D98 161 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 HNRNPABQ99729 332 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 TMEM120AQ9BXJ8 343 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 RANBP17Q9H2T7 1088 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 IL21RQ9HBE5 538 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 SPAG4Q9NPE6 437 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 LIN7CQ9NUP9 197 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 COPG1Q9Y678 874 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 TRIP12Q14669 1992 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-218ENST00000553309 MICAL3Q7RTP6 2002 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 ZBED9Q6R2W3 1325 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 BPTFQ12830 3046 aa5.21□□□□□ -1.58
ATXN3-218ENST00000553309 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 CXorf65A6NEN9 183 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 AGAP5A6NIR3 686 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 EFCAB8A8MWE9 144 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 FOXO6A8MYZ6 492 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 VWA5AO00534 786 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 PER2O15055 1255 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 MSI1O43347 362 aaKnown RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 KINO60870 393 aaKnown RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 SKAP2O75563 359 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 MMP1P03956 469 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 TPM3P06753 285 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 SHMT1P34896 483 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 TNNT3P45378 269 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 GABPB1Q06547 395 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 GALNT3Q14435 633 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 TWISTNBQ3B726 338 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 RABL6Q3YEC7 729 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 ZACNQ401N2 412 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 HSP90B2PQ58FF3 399 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 GET4Q7L5D6 327 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 ATG9AQ7Z3C6 839 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 ADGRA1Q86SQ6 560 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 CPXCR1Q8N123 301 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 ASB5Q8WWX0 329 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 LYZL4Q96KX0 146 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 CTAGE1Q96RT6 745 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 MTG1Q9BT17 334 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 IFIH1Q9BYX4 1025 aaKnown RBP5.2□□□□□ -1.58
ATXN3-218ENST00000553309 LMAN2LQ9H0V9 348 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 WDR26Q9H7D7 661 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 FBXO4Q9UKT5 387 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 MYO10Q9HD67 2058 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 PARP14Q460N5 1801 aa5.2□□□□□ -1.58
ATXN3-218ENST00000553309 USP9XQ93008 2570 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-218ENST00000553309 CCDC196A0A1B0GTZ2 297 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 CCDC189A1A4V9 331 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 MCIDASD6RGH6 385 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 SLC30A4O14863 429 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 ITGA2BP08514 1039 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 WEE2P0C1S8 567 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 LINC00271P0C7V0 271 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 CDC25AP30304 524 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 CDKN2AP42771 156 aaKnown RBP5.19□□□□□ -1.58
ATXN3-218ENST00000553309 HTR3AP46098 478 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 POLE2P56282 527 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 P2RX3P56373 397 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 DYNLL1P63167 89 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms