RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CABIN1Q9Y6J0 2220 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 TNRC6BQ9UPQ9 1833 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 NPIPB15A6NHN6 443 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 C4orf47A7E2U8 309 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ENC1O14682 589 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TPP1O14773 563 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 PFDN6O15212 129 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 STX7O15400 261 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 RASGRP1O95267 797 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TRIM16O95361 564 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 AP2A1O95782 977 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 MT-CYBP00156 380 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TNFP01375 233 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CSF2P04141 144 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 PDHA1P08559 390 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 C1SP09871 688 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 RALBP11234 206 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 MYCLP1P12525 358 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CTSEP14091 401 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 LPOP22079 712 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CXCR5P32302 372 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CD68P34810 354 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ID4P47928 161 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 SPINT3P49223 89 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 PTSQ03393 145 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CDH17Q12864 832 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 RALGDSQ12967 914 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 LRP8Q14114 963 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 PDE1CQ14123 709 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 INPP5AQ14642 412 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 NFATC4Q14934 902 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TAF1AQ15573 450 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CYP1B1Q16678 543 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 SKIDA1Q1XH10 827 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 WSCD2Q2TBF2 565 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 RAET1GQ6H3X3 334 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 KDELC1Q6UW63 502 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ERMP1Q7Z2K6 904 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TMC3Q7Z5M5 1100 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 DNAAF3Q8N9W5 541 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TP53I13Q8NBR0 393 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 SPATA22Q8NHS9 363 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CCDC110Q8TBZ0 833 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 C1orf54Q8WWF1 131 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 VOPP1Q96AW1 172 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ZNF514Q96K75 400 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 CEP41Q9BYV8 373 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 GPR27Q9NS67 375 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 BFARQ9NZS9 450 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 VPS18Q9P253 973 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 KLQ9UEF7 1012 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 RIMKLBQ9ULI2 386 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ITM2BQ9Y287 266 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 SNX11Q9Y5W9 270 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 DGKBQ9Y6T7 804 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
TRAFD1-208ENST00000552890 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 MAGEB16A2A368 324 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 PATE3B3GLJ2 98 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 SPINT1O43278 529 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 VEGFDO43915 354 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 KCNJ13O60928 360 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 SUN1O94901 812 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 ECEL1O95672 775 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 ATP1A1P05023 1023 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 SLC2A4P14672 509 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 NME1P15531 152 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 CTPS1P17812 591 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 VCLP18206 1134 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 PSMB4P28070 264 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 ILKQ13418 452 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 SEMA5AQ13591 1074 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 IRF4Q15306 451 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 RSPO4Q2I0M5 234 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 UAP1L1Q3KQV9 507 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 SIRPB2Q5JXA9 342 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 FAXCQ5TGI0 409 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 DENND2CQ68D51 928 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 AADACL2Q6P093 401 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 CCDC137Q6PK04 289 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 PPP1R21Q6ZMI0 780 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 DBX2Q6ZNG2 339 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 GCNT7Q6ZNI0 430 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 Q6ZVL8 140 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 MAATS1Q7Z4T9 603 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TECPR1Q7Z6L1 1165 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 ZSWIM9Q86XI8 627 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 GKN2Q86XP6 184 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 PHYKPLQ8IUZ5 450 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TRAM1L1Q8N609 369 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 OR13H1Q8NG92 308 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 OR56A4Q8NGH8 313 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 KLK6Q92876 244 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms