RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 GCH1P30793 250 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ABCD1P33897 745 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 HTR7P34969 479 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 BSGP35613 385 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NNMTP40261 264 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 MTHFRP42898 656 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NOVA1P51513 510 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 INHBCP55103 352 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 EIF3BP55884 814 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 TPTEP56180 551 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NLRP5P59047 1200 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 TAS2R50P59544 299 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 GPC5P78333 572 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ITIH3Q06033 890 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 TROAPQ12815 778 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ALKBH1Q13686 389 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 CRYMQ14894 314 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 PPP2R5BQ15173 497 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 PTPN14Q15678 1187 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 GEN1Q17RS7 908 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 AASDHQ4L235 1098 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 GDF7Q7Z4P5 450 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SERINC5Q86VE9 423 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ZNF575Q86XF7 245 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SYT12Q8IV01 421 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SRFBP1Q8NEF9 429 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 RUFY2Q8WXA3 655 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 GLG1Q92896 1179 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ATP6V0A1Q93050 837 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 KLHL29Q96CT2 875 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 R3HDM4Q96D70 268 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 C5orf34Q96MH7 638 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NECTIN4Q96NY8 510 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 CDCA3Q99618 268 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 PAAF1Q9BRP4 392 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 RIOK1Q9BRS2 568 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ALOXE3Q9BYJ1 711 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 TRIM31Q9BZY9 425 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ARRDC1-AS1Q9H2J1 176 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NRDE2Q9H7Z3 1164 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ZWILCHQ9H900 591 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ENTPD7Q9NQZ7 604 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ARHGEF3Q9NR81 526 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SNX15Q9NRS6 342 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 MRGBPQ9NV56 204 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SETD4Q9NVD3 440 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 INTS13Q9NVM9 706 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 IL1RAPL1Q9NZN1 696 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 HCN3Q9P1Z3 774 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 CEP72Q9P209 647 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 FBXO4Q9UKT5 387 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 ISY1Q9ULR0 285 aaKnown RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 CORO1CQ9ULV4 474 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-208ENST00000551691 VPS4AQ9UN37 437 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 NAALADL1Q9UQQ1 740 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 OSGIN2Q9Y236 505 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SSX2IPQ9Y2D8 614 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 PSAT1Q9Y617 370 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 PIAS3Q9Y6X2 628 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 MYH7BA7E2Y1 1941 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 KIAA1671Q9BY89 1806 aa3.95□□□□□ -1.78
LIMA1-208ENST00000551691 SHROOM3Q8TF72 1996 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 NAV1Q8NEY1 1877 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 UTP20O75691 2785 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 LCTP09848 1927 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 A1L4Q6 167 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TMEM8BA6NDV4 472 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 GAGE10A6NGK3 116 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 C16orf96A6NNT2 1141 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 A8MVJ9 347 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MYO1GB0I1T2 1018 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CLGNO14967 610 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 SLC16A3O15427 465 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TMPRSS11DO60235 418 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 SEC14L2O76054 403 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CXCL14O95715 111 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 DLDP09622 509 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 UQCRFS1P1P0C7P4 283 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ACP5P13686 325 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ADRA1DP25100 572 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 EPHA8P29322 1005 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CA8P35219 290 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 EIF2DP41214 584 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 STARD6P59095 220 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 RPL7AP62424 266 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CXADRP78310 365 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TLE3Q04726 772 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CDK18Q07002 472 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CCDC15Q0P6D6 951 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CDC16Q13042 620 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MTAPQ13126 283 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 LPIN1Q14693 890 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TTC39AQ5SRH9 613 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 FAM102AQ5T9C2 384 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 LAIR1Q6GTX8 287 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MTHFD1LQ6UB35 978 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms