RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ASNSD1Q9NWL6 643 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ABI3Q9P2A4 366 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 PTRH2Q9Y3E5 179 aaKnown RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 RFX7Q2KHR2 1363 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 FRMPD3Q5JV73 1810 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 MROH5Q6ZUA9 1318 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ARHGAP10A1A4S6 786 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 H0YIZ8 118 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 SCAMP1O15126 338 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 STRNO43815 780 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 IPO7O95373 1038 aaKnown RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 SERPINC1P01008 464 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 FCGR2AP12318 317 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 LAG3P18627 525 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 FOLR3P41439 243 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 LMAN1P49257 510 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 GNAQP50148 359 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 RHAGQ02094 409 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 MFSD13AQ14CX5 517 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 RNPS1Q15287 305 aaKnown RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 RABL6Q3YEC7 729 aaPredicted RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 FKBP1CQ5VVH2 108 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 KAZNQ674X7 775 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 CLEC17AQ6ZS10 378 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ASB10Q8WXI3 467 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 VPS33AQ96AX1 596 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 H2AFJQ9BTM1 129 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 MRIQ9BWK5 157 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ZNF341Q9BYN7 854 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 DEF6Q9H4E7 631 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ENTPD7Q9NQZ7 604 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 WSB2Q9NYS7 404 aaPredicted RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 CPSF2Q9P2I0 782 aaKnown RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 WDR35Q9P2L0 1181 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 PADI1Q9ULC6 663 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 ADAMTS5Q9UNA0 930 aa6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 REXO2Q9Y3B8 237 aaKnown RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 SIRT4Q9Y6E7 314 aaPredicted RBP6.35□□□□□ -1.39
TGFBR1-208ENST00000550253 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 hCG_1809904A0A1W2PP81 198 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 A0A1W2PPE2 198 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 A0A1W2PR64 198 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 TTC36A6NLP5 189 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 CLIC1O00299 241 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 SLC7A4O43246 635 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 HLA-DQA2P01906 255 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 NPSP0C0P6 89 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ACRV1P26436 265 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 POU1F1P28069 291 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 THPOP40225 353 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 MSH2P43246 934 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 CAPZA2P47755 286 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 RFX5P48382 616 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 VPS41P49754 854 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 MFAP4P55083 255 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 COG2Q14746 738 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 PLAC9Q5JTB6 97 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 SERPINA13PQ6UXR4 307 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 GLDNQ6ZMI3 551 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 GET4Q7L5D6 327 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 KBTBD6Q86V97 674 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ZSCAN30Q86W11 494 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ARHGEF19Q8IW93 802 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 CHCHD4Q8N4Q1 142 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ZNF276Q8N554 614 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 FAM151AQ8WW52 585 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 TFAP2BQ92481 460 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ZNF653Q96CK0 615 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 CCDC34Q96HJ3 373 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ADAD1Q96M93 576 aaKnown RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 DEFB118Q96PH6 123 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ZNF347Q96SE7 839 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 MMS19Q96T76 1030 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 GPATCH1Q9BRR8 931 aaKnown RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 GATA5Q9BWX5 397 aaPredicted RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 XAB2Q9HCS7 855 aaKnown RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ASAH2Q9NR71 780 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 DLGAP2Q9P1A6 1054 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 SEC63Q9UGP8 760 aaKnown RBP6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 GTF3C4Q9UKN8 822 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 ICKQ9UPZ9 632 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 SNX5Q9Y5X3 404 aa6.34□□□□□ -1.39
TGFBR1-208ENST00000550253 XIRP2A4UGR9 3374 aa6.34□□□□□ -1.4
TGFBR1-208ENST00000550253 REV3LO60673 3130 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 A0A0G2JLL6 359 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 TCRBV7S3A2A0A539 114 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 TARSL2A2RTX5 802 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 DDTLA6NHG4 134 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 H0Y626 953 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 PEX1O43933 1283 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 FRAT2O75474 233 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 TGDSO95455 350 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 CBX6O95503 412 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ENO1P06733 434 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ITGAMP11215 1152 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 EDN2P20800 178 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms