RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ALG9Q9H6U8 611 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CYP4F12Q9HCS2 524 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ZDHHC7Q9NXF8 308 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 RNF112Q9ULX5 631 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CRYL1Q9Y2S2 319 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 PKP3Q9Y446 797 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ASB3Q9Y575 518 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 PCDHB1Q9Y5F3 818 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 COPG1Q9Y678 874 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ARL5AQ9Y689 179 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 UBA6A0AVT1 1052 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 NT5C1B-RDH14C9J2C7 533 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 H0Y626 953 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 H3BMM5 538 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 H3BNC9 293 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 H7C0S8 307 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TRIM38O00635 465 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CASQ2O14958 399 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 KIF1CO43896 1103 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PDE5AO76074 875 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SLC4A1P02730 911 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 ESR1P03372 595 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 MBL2P11226 248 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PKMP14618 531 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 HNRNPLP14866 589 aaKnown RBP eCLIP8.93□□□□□ -0.985e-12■■■■■ 33.5
TMEM116-209ENST00000550020 PFKLP17858 780 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CR2P20023 1033 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PPM1AP35813 382 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PTGER3P43115 390 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PSMD8P48556 350 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 GATMP50440 423 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 ADARP55265 1226 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 GRIK2Q13002 908 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 LCP2Q13094 533 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 RAB33AQ14088 237 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CCNIQ14094 377 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PTK2BQ14289 1009 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 ANKS6Q68DC2 871 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 RSPO2Q6UXX9 243 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 ATG14Q6ZNE5 492 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 ANKRD33Q7Z3H0 272 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SPATA19Q7Z5L4 167 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 KBTBD6Q86V97 674 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 RNF168Q8IYW5 571 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 FBXO39Q8N4B4 442 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SPATA6LQ8N4H0 392 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 DCAF4L2Q8NA75 395 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 LPCAT1Q8NF37 534 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 OR7D4Q8NG98 312 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TSPEARQ8WU66 669 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 NRG4Q8WWG1 115 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CCDC124Q96CT7 223 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 RCN3Q96D15 328 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PHF21BQ96EK2 531 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 LRGUKQ96M69 825 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TOX2Q96NM4 488 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 BTBD9Q96Q07 612 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CDRT15Q96T59 188 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 C2orf49Q9BVC5 232 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SHCBP1LQ9BZQ2 653 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TRIM15Q9C019 465 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 UNC93B1Q9H1C4 597 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 CRISPLD1Q9H336 500 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 GSTO2Q9H4Y5 243 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SAGE1Q9NXZ1 904 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 MARCH4Q9P2E8 410 aaPredicted RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PDP2Q9P2J9 529 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SUCOQ9UBS9 1254 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 TRMT6Q9UJA5 497 aaKnown RBP8.93□□□□□ -0.98
TMEM116-209ENST00000550020 PSMD13Q9UNM6 376 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 YIPF1Q9Y548 306 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 RAI2Q9Y5P3 530 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 SLC30A1Q9Y6M5 507 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 WASF2Q9Y6W5 498 aa8.93□□□□□ -0.98
TMEM116-209ENST00000550020 A0A0D9SEW6 157 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 ABHD14A-ACY1A0A1B0GW23 586 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 SUPT3HB4E1H0 165 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 ANKRD66B4E2M5 251 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 E5RI56 91 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 AURKAO14965 403 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 AZIN1O14977 448 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 MUSKO15146 869 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 SNX2O60749 519 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 PQBP1O60828 265 aaKnown RBP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 SUPT3HO75486 399 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 SKAP2O75563 359 aaPredicted RBP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 BCAS2O75934 225 aaPredicted RBP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 SMNDC1O75940 238 aaKnown RBP eCLIP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 C1RP00736 705 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 F7P08709 466 aaPredicted RBP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 ENO3P13929 434 aaPredicted RBP8.92□□□□□ -0.98
TMEM116-209ENST00000550020 IDO1P14902 403 aa8.92□□□□□ -0.98
TMEM116-209ENST00000550020 RAG1P15918 1043 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms