RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 AP4S1Q9Y587 144 aa11.11□□□□□ -0.63
LINC00661-204ENST00000549354 LTBP2Q14767 1821 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 WASH4PA8MWX3 477 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 SBK3P0C264 359 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 MYL4P12829 197 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 ITGB6P18564 788 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 CCR1P32246 355 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 GRIA3P42263 894 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 PSME3P61289 254 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 OTUD3Q5T2D3 398 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 GPR158Q5T848 1215 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 AFMIDQ63HM1 303 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 RSPO2Q6UXX9 243 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 DNAJC14Q6Y2X3 702 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 LPCAT2Q7L5N7 544 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF786Q8N393 782 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 MARVELD2Q8N4S9 558 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 ATPAF2Q8N5M1 289 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 MIPOL1Q8TD10 442 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 BCL7CQ8WUZ0 217 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 SCLYQ96I15 445 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 SIKE1Q9BRV8 207 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 STN1Q9H668 368 aaKnown RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 TLR6Q9Y2C9 796 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 RNF103-CHMP3A0A140T963 221 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 MTMR11A4FU01 709 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 CRCPO75575 148 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 TMCC1O94876 653 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 HAPLN1P10915 354 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 RFC2P35250 354 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 PIK3CGP48736 1102 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 MGAT5BQ3V5L5 792 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 SPANXN3Q5MJ09 141 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 LIPMQ5VYY2 423 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 RP9Q8TA86 221 aaKnown RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 CYGBQ8WWM9 190 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF419Q96HQ0 510 aaPredicted RBP11.1□□□□□ -0.63
LINC00661-204ENST00000549354 SERPINB11Q96P15 392 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 VAT1Q99536 393 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 C1orf50Q9BV19 199 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
LINC00661-204ENST00000549354 TCAF2A6NFQ2 919 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 FGF10O15520 208 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CACNG3O60359 315 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 ZDHHC11BP0C7U3 371 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 STMN1P16949 149 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SLC1A2P43004 574 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 HPCAP84074 193 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PLCL1Q15111 1095 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 DBN1Q16643 649 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 RTP2Q5QGT7 225 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 HERC6Q8IVU3 1022 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF683Q8IZ20 524 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CENPLQ8N0S6 344 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 LSMEM2Q8N112 164 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CWH43Q9H720 699 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PTTG2Q9NZH5 202 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TRHDEQ9UKU6 1024 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 DOLKQ9UPQ8 538 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 BACE2Q9Y5Z0 518 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PRORSD1PA6NEY8 169 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TBKBP1A7MCY6 615 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 MAN1A2O60476 641 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PAGE1O75459 146 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SLC35E2BP0CK96 405 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CD86P42081 329 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 PSMD7P51665 324 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 NDST2P52849 883 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TLE2Q04725 743 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 GALNT3Q14435 633 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 C16orf72Q14CZ0 275 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 INSCQ1MX18 579 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 VPS26BQ4G0F5 336 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SLC8B1Q6J4K2 584 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 ZBTB49Q6ZSB9 765 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TXNDC5Q8NBS9 432 aaKnown RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 FCRL2Q96LA5 508 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 NSUN5Q96P11 429 aaKnown RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 HAUS8Q9BT25 410 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 BPIFA1Q9NP55 256 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SEMA4BQ9NPR2 832 aaPredicted RBP11.09□□□□□ -0.63
LINC00661-204ENST00000549354 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 A0A0J9YVX5 310 aa11.09□□□□□ -0.63
LINC00661-204ENST00000549354 NT5C1B-RDH14C9J2C7 533 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms