RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PPFIA2O75334 1257 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 LIFP15018 202 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 CD82P27701 267 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 HTR7P34969 479 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 COPB1P53618 953 aaKnown RBP16.45■□□□□ 0.22
SSH1-208ENST00000548522 CDK3Q00526 305 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 ILF3Q12906 894 aaKnown RBP eCLIP16.45■□□□□ 0.22
SSH1-208ENST00000548522 IQCB1Q15051 598 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
SSH1-208ENST00000548522 NAGSQ8N159 534 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 ENOX1Q8TC92 643 aaKnown RBP16.45■□□□□ 0.22
SSH1-208ENST00000548522 FNIP1Q8TF40 1166 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 ART4Q93070 314 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
SSH1-208ENST00000548522 PSKH2Q96QS6 385 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 TEX101Q9BY14 249 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 GSDMCQ9BYG8 508 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 SLC25A18Q9H1K4 315 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
SSH1-208ENST00000548522 B3GALT1Q9Y5Z6 326 aa16.45■□□□□ 0.22
SSH1-208ENST00000548522 ARHGEF17Q96PE2 2063 aaPredicted RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6CA6NDK9 693 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6BA6NDN3 693 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 TMCO5BA8MYB1 307 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 HGSO14964 777 aaPredicted RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 PPM1DO15297 605 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 HEXIM1O94992 359 aaKnown RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6DP0CG33 693 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 PSMA2P25787 234 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 CDC25BP30305 580 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 UGT1A3P35503 534 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 AP1S1P61966 158 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 CTBSQ01459 385 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 IL10RBQ08334 325 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 MAMLD1Q13495 774 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 PPP6R3Q5H9R7 873 aaPredicted RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 TMEM164Q5U3C3 297 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 DOK6Q6PKX4 331 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 RFLNAQ6ZTI6 216 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 ZNF761Q86XN6 746 aaPredicted RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 PGBD5Q8N414 524 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 PDCD6IPQ8WUM4 868 aaKnown RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 DTD2Q96FN9 168 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 SMIM14Q96QK8 99 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 PHPT1Q9NRX4 125 aaPredicted RBP16.44■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6AQ9NYA3 693 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
SSH1-208ENST00000548522 NPIPB15A6NHN6 443 aaPredicted RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 LGALS16A8MUM7 142 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 DAPK3O43293 454 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 HTRA2O43464 458 aaPredicted RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 PEX11BO96011 259 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 CPP00450 1065 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 THRAP10827 490 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 VIPR1P32241 457 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 LIMK2P53671 638 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 POLE2P56282 527 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 POLR2LP62875 67 aaKnown RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSH1-208ENST00000548522 TRAF2Q12933 501 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 SKIDA1Q1XH10 827 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 TMCO4Q5TGY1 634 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 ACAD10Q6JQN1 1059 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 Q6ZVL8 140 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 TRIM74Q86UV6 250 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 TAAR9Q96RI9 348 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 EPN3Q9H201 632 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 TRNAU1APQ9NX07 287 aaKnown RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 OCIAD1Q9NX40 245 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 AKAP7Q9P0M2 348 aaPredicted RBP16.43■□□□□ 0.22
SSH1-208ENST00000548522 SEPT3Q9UH03 358 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 SLC17A4Q9Y2C5 497 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 PCDHGA3Q9Y5H0 932 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 NBASA2RRP1 2371 aa16.43■□□□□ 0.22
SSH1-208ENST00000548522 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6L6A8MZA4 724 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 PDE2AO00408 941 aaPredicted RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 SOD1P00441 154 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 SFTPCP11686 197 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 CR2P20023 1033 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 MIPP30301 263 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 ADCY8P40145 1251 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 ATP1A2P50993 1020 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 MAXP61244 160 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 DPYSQ14117 519 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 RFTN1Q14699 578 aaPredicted RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 ERMARDQ5T6L9 678 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 RAET1GQ6H3X3 334 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 BORAQ6PGQ7 559 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 CBARPQ8N350 705 aaPredicted RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 SPOCK2Q92563 424 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms