RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PRCCQ92733 491 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 SIPA1Q96FS4 1042 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CRELD1Q96HD1 420 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PPP1R16AQ96I34 528 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CAPZA3Q96KX2 299 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 SPATA13Q96N96 652 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 AGAP3Q96P47 875 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 TUBGCP5Q96RT8 1024 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 VAT1Q99536 393 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 IL12RB2Q99665 862 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 HEPHQ9BQS7 1158 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 AP1M1Q9BXS5 423 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 TPSD1Q9BZJ3 242 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 GBA3Q9H227 469 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 ATP13A3Q9H7F0 1226 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 C10orf88Q9H8K7 445 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 RBM22Q9NW64 420 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 USP36Q9P275 1121 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 KLHL8Q9P2G9 620 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 HECAQ9UBI9 543 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 IL36AQ9UHA7 158 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 EVLQ9UI08 416 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 DNPEPQ9ULA0 475 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 KNL1Q8NG31 2342 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 EP300Q09472 2414 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF292O60281 2723 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF106Q9H2Y7 1883 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 PIEZO1Q92508 2521 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC163A0A0D9SF12 145 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 INSIG1O15503 277 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 PHF2O75151 1096 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SOCS5O75159 536 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 POP4O95707 220 aaKnown RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 IGLV3-19P01714 112 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DNTTP04053 509 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TUBB4AP04350 444 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ITGAVP06756 1048 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ACADMP11310 421 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 C5AR1P21730 350 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DRD3P35462 400 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CSNK1DP48730 415 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 FNTAP49354 379 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SCNN1BP51168 640 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 RPS14P62263 151 aaKnown RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DSC2Q02487 901 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CSTF1Q05048 431 aaKnown RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 RAD51Q06609 339 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ITKQ08881 620 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 NSUN2Q08J23 767 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DMWDQ09019 674 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SNX1Q13596 522 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 GRM3Q14832 879 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CCNG2Q16589 344 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CYP1B1Q16678 543 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 MYLK3Q32MK0 819 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TEX44Q53QW1 395 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CFAP58Q5T655 872 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 AGBL4Q5VU57 503 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 FAM46CQ5VWP2 391 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ITPRIPL1Q6GPH6 555 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 PARS2Q7L3T8 475 aaKnown RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ARMCX6Q7L4S7 300 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SRLQ86TD4 932 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF567Q8N184 647 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 PLD6Q8N2A8 252 aaKnown RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 AADATQ8N5Z0 425 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CNTD1Q8N815 330 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC89Q8N998 374 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 FAM71DQ8N9W8 422 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 FAM181AQ8N9Y4 354 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 AGBL5Q8NDL9 886 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TMIEQ8NEW7 156 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC110Q8TBZ0 833 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 VOPP1Q96AW1 172 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 RTP4Q96DX8 246 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 LRIG1Q96JA1 1093 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TEKT5Q96M29 485 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 NUDCD1Q96RS6 583 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SEMA3CQ99985 751 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TMEM121Q9BTD3 319 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 FAM126AQ9BYI3 521 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-211ENST00000546304 NOD2Q9HC29 1040 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 CD93Q9NPY3 652 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 HOMER3Q9NSC5 361 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SERGEFQ9UGK8 458 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 EBF1Q9UH73 591 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 RSPH14Q9UHP6 348 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 TRHDEQ9UKU6 1024 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SARDHQ9UL12 918 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SCML1Q9UN30 329 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms