RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 COQ10AQ96MF6 247 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 FCRL3Q96P31 734 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 WRAP53Q9BUR4 548 aaKnown RBP16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 TPSD1Q9BZJ3 242 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 BTBD1Q9H0C5 482 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 CDC42EP4Q9H3Q1 356 aaKnown RBP16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 NINJ2Q9NZG7 142 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 CEP192Q8TEP8 1941 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 UQCRHLA0A096LP55 91 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 ZCWPW2A0A1B0GU75 182 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 AXIN1O15169 862 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 STX7O15400 261 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 BUD23O43709 281 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 SLC4A1P02730 911 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 UQCRHP07919 91 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 GSTA2P09210 222 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 C6P13671 934 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 GM2AP17900 193 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 ACSL1P33121 698 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 PXNP49023 591 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 FRG1Q14331 258 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 PTPRCAPQ14761 206 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 CRYMQ14894 314 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 MAP7D1Q3KQU3 841 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 SPANXN3Q5MJ09 141 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 KIAA1161Q6NSJ0 714 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 ESRP1Q6NXG1 681 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 CES3Q6UWW8 571 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 UNC5AQ6ZN44 842 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 TRMT10CQ7L0Y3 403 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 TECPR1Q7Z6L1 1165 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 C1orf210Q8IVY1 113 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 MAML2Q8IZL2 1156 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 OR2T34Q8NGX1 318 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 CXorf40AQ8TE69 158 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 ZNF669Q96BR6 464 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 DNAJC1Q96KC8 554 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 TTC25Q96NG3 672 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 LRRC4CQ9HCJ2 640 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 WSB2Q9NYS7 404 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 NFKBIL1Q9UBC1 381 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 CYP8B1Q9UNU6 501 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 PKP3Q9Y446 797 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 FAM169AQ9Y6X4 670 aa16.27■□□□□ 0.2
PPP1CA-211ENST00000546202 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PLXNB3Q9ULL4 1909 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 CCDC78A2IDD5 438 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 LRRC72A6NJI9 287 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 H7C0S8 307 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 MMP20O60882 483 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 ERLIN1O75477 346 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PCDH8O95206 1070 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 CD6P30203 668 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 HADHAP40939 763 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 SPINT3P49223 89 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 ARSDP51689 593 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PMS2P54278 862 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 GPX6P59796 221 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 DMWDQ09019 674 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 AGERQ15109 404 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 KYNUQ16719 465 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 TMEM259Q4ZIN3 620 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 KIAA0930Q6ICG6 404 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 CYP2U1Q7Z449 544 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 HNRNPLLQ8WVV9 542 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 CFAP36Q96G28 342 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 RAD18Q9NS91 495 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 PKD2L2Q9NZM6 624 aa16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 ZFR2Q9UPR6 939 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3DA0A087WVF3 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3IA0A087WXS9 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3EA0A087X179 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3KA0A087X1G2 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3FA6NER0 549 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 IGLON5A6NGN9 336 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3LB9A6J9 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 RNGTTO60942 597 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 SPAG6O75602 509 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 RPP40O75818 363 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 SEMA4FO95754 770 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 TBC1D3HP0C7X1 549 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 H2AFXP16104 143 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 BPIP17213 487 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 PAMP19021 973 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 ARNTP27540 789 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 SSTR1P30872 391 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 NBL1P41271 181 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 NUBP1P53384 320 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 DCDC1P59894 354 aa16.25■□□□□ 0.19
PPP1CA-211ENST00000546202 RPS21P63220 83 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms