RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PRKD1	Q15139	912 aa	Predicted RBP	13.38	□□□□□ -0.27
POLE-222	ENST00000545015	PTPRR	Q15256	657 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	PPP2R5E	Q16537	467 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	TEX44	Q53QW1	395 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	ODF2	Q5BJF6	829 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	GUSBP11	Q6P575	273 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	NPNT	Q6UXI9	565 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	ADAMTSL4	Q6UY14	1074 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	SPOCD1	Q6ZMY3	1216 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	HEATR4	Q86WZ0	1026 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	RCOR2	Q8IZ40	523 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	GPR156	Q8NFN8	814 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	OR6C4	Q8NGE1	309 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	EXD1	Q8NHP7	514 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	LRRN4	Q8WUT4	740 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	IMP4	Q96G21	291 aa	Known RBP	13.38	□□□□□ -0.27
POLE-222	ENST00000545015	TRIB3	Q96RU7	358 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	SLC25A51	Q9H1U9	297 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	PADI4	Q9UM07	663 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	SLC17A4	Q9Y2C5	497 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	LRP4	O75096	1905 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	SHROOM3	Q8TF72	1996 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	PKD1L2	Q7Z442	2459 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	hCG_1818297	A0A087WSY0	165 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	PRSS38	A1L453	326 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	SOWAHD	A6NJG2	315 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	ANKRD66	B4E2M5	251 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	PJA2	O43164	708 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	MTSS1	O43312	755 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	CST8	O60676	142 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	CEACAM5	P06731	702 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	IVL	P07476	585 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	MYF5	P13349	255 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	CD86	P42081	329 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	COPS2	P61201	443 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	CYP4F3	Q08477	520 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	AP1B1	Q10567	949 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	QPCT	Q16769	361 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	NYAP1	Q6ZVC0	841 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.37	□□□□□ -0.27
POLE-222	ENST00000545015	MAPK15	Q8TD08	544 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	GPBAR1	Q8TDU6	330 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	RBM41	Q96IZ5	413 aa	Known RBP	13.37	□□□□□ -0.27
POLE-222	ENST00000545015	DEPDC7	Q96QD5	511 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	ADGRE3	Q9BY15	652 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	ABCG8	Q9H221	673 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.37	□□□□□ -0.27
POLE-222	ENST00000545015	DOLK	Q9UPQ8	538 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	EFR3B	Q9Y2G0	817 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
POLE-222	ENST00000545015	REXO2	Q9Y3B8	237 aa	Known RBP	13.37	□□□□□ -0.27
POLE-222	ENST00000545015	TTLL3	Q9Y4R7	772 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	APC2	O95996	2303 aa		13.37	□□□□□ -0.27
POLE-222	ENST00000545015	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	RCCD1	A6NED2	376 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	NTN3	O00634	580 aa	Predicted RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	IPO7	O95373	1038 aa	Known RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	FUCA1	P04066	466 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	PNLIP	P16233	465 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	PTPN3	P26045	913 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	CDC25B	P30305	580 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	CTNNA1	P35221	906 aa	Known RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	PTPN7	P35236	360 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	ADCY2	Q08462	1091 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	PERM1	Q5SV97	790 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	RAET1G	Q6H3X3	334 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	IGF2-AS	Q6U949	168 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	RAD9B	Q6WBX8	426 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	DAAM2	Q86T65	1068 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	NT5DC3	Q86UY8	548 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	C17orf82	Q86X59	251 aa	Predicted RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	TMEM139	Q8IV31	216 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	LPCAT1	Q8NF37	534 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	TFB1M	Q8WVM0	346 aa	Known RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	AP2M1	Q96CW1	435 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	COX14	Q96I36	57 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	TEKT5	Q96M29	485 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	SMIM14	Q96QK8	99 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	VAT1	Q99536	393 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	MLPH	Q9BV36	600 aa	Predicted RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	ABCG4	Q9H172	646 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	GOLPH3	Q9H4A6	298 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	GLOD4	Q9HC38	313 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	MRPL40	Q9NQ50	206 aa	Known RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	IMPACT	Q9P2X3	320 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.36	□□□□□ -0.27
POLE-222	ENST00000545015	TFR2	Q9UP52	801 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	GPR34	Q9UPC5	381 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	PCDHA3	Q9Y5H8	950 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	ZFHX4	Q86UP3	3567 aa		13.36	□□□□□ -0.27
POLE-222	ENST00000545015	ACACA	Q13085	2346 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015		A0A087WV48	116 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CPED1	A4D0V7	1026 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	HACD1	B0YJ81	288 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	DXO	O77932	396 aa	Known RBP	13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CLDN7	O95471	211 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	TNNT1	P13805	278 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	PECAM1	P16284	738 aa	Predicted RBP	13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CTNNA2	P26232	953 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	GPR1	P46091	355 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms