RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 TXNRD3NBQ6F5E7 133 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 GKN2Q86XP6 184 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 SLC35F3Q8IY50 421 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 ZNF564Q8TBZ8 553 aaPredicted RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 BTBD6Q96KE9 485 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 WDR92Q96MX6 357 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 STRADBQ9C0K7 418 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 CLPBQ9H078 707 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 LRRC4CQ9HCJ2 640 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 KLQ9UEF7 1012 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 PADI4Q9UM07 663 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 CACNB4O00305 520 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 PDE2AO00408 941 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 HTRA2O43464 458 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 PEX11BO96011 259 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 PCCBP05166 539 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 HOXC4P09017 264 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 WT1P19544 449 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 KIAA1024LP59773 190 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 RALGDSQ12967 914 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 EIF3IQ13347 325 aaKnown RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 RD3Q7Z3Z2 195 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 ZFAND4Q86XD8 727 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 FAM26EQ8N5C1 309 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 FAM71BQ8TC56 605 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 HTR3CQ8WXA8 447 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 TSACCQ96A04 125 aaPredicted RBP16.23■□□□□ 0.19
DDX55-212ENST00000544738 MGME1Q9BQP7 344 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 IGSF5Q9NSI5 407 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 UVRAGQ9P2Y5 699 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 GULP1Q9UBP9 304 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 PCDHB11Q9Y5F2 797 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 PCDHGC4Q9Y5F7 938 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 DGKBQ9Y6T7 804 aa16.23■□□□□ 0.19
DDX55-212ENST00000544738 TNFRSF10CO14798 259 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 NVLO15381 856 aaKnown RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 TNFP01375 233 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 TRIM23P36406 574 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 MMP13P45452 471 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 ACOX1Q15067 660 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 MAP7D3Q8IWC1 876 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 ARL10Q8N8L6 244 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 PLA2G15Q8NCC3 412 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 OR56A4Q8NGH8 313 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 PDCD6IPQ8WUM4 868 aaKnown RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 CTNNBL1Q8WYA6 563 aaPredicted RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 GFM1Q96RP9 751 aaKnown RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 XPO4Q9C0E2 1151 aaKnown RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 NOD2Q9HC29 1040 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 HAUS2Q9NVX0 235 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 KCNK4Q9NYG8 393 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 B4GALT6Q9UBX8 382 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 ACSL6Q9UKU0 697 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 PHTF1Q9UMS5 762 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 LRRK1Q38SD2 2015 aa16.22■□□□□ 0.19
DDX55-212ENST00000544738 COL27A1Q8IZC6 1860 aaPredicted RBP16.22■□□□□ 0.19
DDX55-212ENST00000544738 ANKRD36A6QL64 1941 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 CLEC18AA5D8T8 446 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 ENO4A6NNW6 628 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 TMX2-CTNND1H3BSU7 103 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 NTN3O00634 580 aaPredicted RBP16.21■□□□□ 0.19
DDX55-212ENST00000544738 CBFA2T2O43439 604 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 CPP00450 1065 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 CYP2A6P11509 494 aaPredicted RBP16.21■□□□□ 0.19
DDX55-212ENST00000544738 IL4RP24394 825 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 TRIM14Q14142 442 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 PDK2Q15119 407 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 SLC18A3Q16572 532 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
DDX55-212ENST00000544738 PNCKQ6P2M8 343 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 CLEC18BQ6UXF7 455 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 NDUFAF2Q8N183 169 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 PGBD5Q8N414 524 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 KCTD6Q8NC69 237 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 CLEC18CQ8NCF0 446 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 OR6C4Q8NGE1 309 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 OR8K1Q8NGG5 319 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 COQ10AQ96MF6 247 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDX55-212ENST00000544738 ZNHIT6Q9NWK9 470 aaKnown RBP16.21■□□□□ 0.19
DDX55-212ENST00000544738 NENFQ9UMX5 172 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 GPR34Q9UPC5 381 aa16.21■□□□□ 0.19
DDX55-212ENST00000544738 ICE1Q9Y2F5 2266 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 PRAMEF33A0A0G2JMD5 474 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
DDX55-212ENST00000544738 A8MX80 341 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 PROSCO94903 275 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 KRT7P08729 469 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 CES1P23141 567 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 VIPR1P32241 457 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 CCL7P80098 99 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 MMRN1Q13201 1228 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 ARMC12Q5T9G4 340 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms