RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 PLD5Q8N7P1 536 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ARL10Q8N8L6 244 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF548Q8NEK5 533 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDH19Q8TAB3 1148 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MAPK15Q8TD08 544 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MAML1Q92585 1016 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 BMFQ96LC9 184 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 TTC25Q96NG3 672 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CAMK1GQ96NX5 476 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 DPYSL5Q9BPU6 564 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 FSD1LQ9BXM9 530 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PACSIN1Q9BY11 444 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MAGEB5Q9BZ81 275 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 NRSN2Q9GZP1 204 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC25A51Q9H1U9 297 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CLMPQ9H6B4 373 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 RMI1Q9H9A7 625 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 GPR27Q9NS67 375 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ETNK2Q9NVF9 386 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 DTLQ9NZJ0 730 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 HACD3Q9P035 362 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 B4GALT6Q9UBX8 382 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 FAM153AQ9UHL3 310 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 NENFQ9UMX5 172 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 GPR34Q9UPC5 381 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 TNRC6BQ9UPQ9 1833 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CLCA2Q9UQC9 943 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 AAR2Q9Y312 384 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PPIL1Q9Y3C6 166 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PKP3Q9Y446 797 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ACTL7AQ9Y615 435 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 AK5Q9Y6K8 562 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CHD5Q8TDI0 1954 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDH15Q96QU1 1955 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ATMQ13315 3056 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 A0A0J9YYE9 177 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 C1orf232A0A0U1RR37 186 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 MACROD2A1Z1Q3 448 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 KLHL33A6NCF5 533 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 RHPN2P1A8MT19 583 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ANKRD66B4E2M5 251 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 H7C0C1 242 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 APOC4-APOC2K7ER74 178 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 K7ESM1 405 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PSMD3O43242 534 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SIGLEC6O43699 453 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ABCB7O75027 752 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SDC3O75056 442 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 KRT38O76015 456 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 DKK1O94907 266 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 EPOP01588 193 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 TRBC1P01850 177 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 APOC2P02655 101 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CD48P09326 243 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PYGMP11217 842 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PNLIPP16233 465 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CR2P20023 1033 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 IL4RP24394 825 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CD86P42081 329 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 MLLT3P42568 568 aaPredicted RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CDKN2BP42772 138 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ATP5OP48047 213 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PPM1FP49593 454 aaPredicted RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ACADVLP49748 655 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ARSEP51690 589 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 VAV2P52735 878 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 GEMP55040 296 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 MAXP61244 160 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 DYNLT1P63172 113 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CDK18Q07002 472 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 MPP3Q13368 585 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 GTF2H3Q13889 308 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SPIDRQ14159 915 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 CLPPQ16740 277 aaPredicted RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 WSCD2Q2TBF2 565 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 PROX2Q3B8N5 592 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 LRRC73Q5JTD7 316 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 C6orf132Q5T0Z8 1188 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ARTNQ5T4W7 220 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SEL1L2Q5TEA6 688 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 BROXQ5VW32 411 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF449Q6P9G9 518 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 DHRS13Q6UX07 377 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 RBM44Q6ZP01 1051 aaKnown RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ARHGAP36Q6ZRI8 547 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC22A18ASQ8N1D0 253 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC25A45Q8N413 288 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 ARL14Q8N4G2 192 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 TP53I13Q8NBR0 393 aaPredicted RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 LPCAT1Q8NF37 534 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 BRSK1Q8TDC3 778 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 MAIP1Q8WWC4 291 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 RAPGEF5Q92565 580 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 TMEM159Q96B96 161 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 SH3KBP1Q96B97 665 aa5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 RNF25Q96BH1 459 aaPredicted RBP5.6□□□□□ -1.51
CLSTN3-215ENST00000544584 AP2M1Q96CW1 435 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms