RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RAD51Q06609 339 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 STX3Q13277 289 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 TSNAXIP1Q2TAA8 658 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 GAB4Q2WGN9 574 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 ZCCHC23Q6ZST2 131 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 PAF1Q8N7H5 531 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 OR2A12Q8NGT7 310 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 RDH11Q8TC12 318 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 FRS2Q8WU20 508 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 CYB5D2Q8WUJ1 264 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 SORCS1Q8WY21 1168 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 NXNL1Q96CM4 212 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 ZFYVE19Q96K21 471 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 ZNF641Q96N77 438 aaPredicted RBP19.81■□□□□ 0.76
COPS7A-218ENST00000543939 LYSMD1Q96S90 227 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 FAM83CQ9BQN1 747 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 EBF3Q9H4W6 596 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 MID2Q9UJV3 735 aa19.81■□□□□ 0.76
COPS7A-218ENST00000543939 CCT8L1PA6NM43 557 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 DNAJC6O75061 913 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 TULP3O75386 442 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 SERPINE1P05121 402 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 SBK3P0C264 359 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 TROVE2P10155 538 aaKnown RBP eCLIP19.8■□□□□ 0.76
COPS7A-218ENST00000543939 FDXRP22570 491 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 OVGP1Q12889 678 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 LRRC8EQ6NSJ5 796 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 CCDC91Q7Z6B0 441 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 CHST14Q8NCH0 376 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 OR6Y1Q8NGX8 325 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 TTC8Q8TAM2 541 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 C10orf82Q8WW14 230 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 LPGAT1Q92604 370 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 ZDHHC6Q9H6R6 413 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 ZFYVE1Q9HBF4 777 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 IGSF5Q9NSI5 407 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 CDH7Q9ULB5 785 aa19.8■□□□□ 0.76
COPS7A-218ENST00000543939 TARM1B6A8C7 271 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 ASLP04424 464 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 BMP8BP34820 402 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 CDKN1CP49918 316 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TIAL1Q01085 375 aaKnown RBP eCLIP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 COL13A1Q5TAT6 717 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TANGO2Q6ICL3 276 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 PSAPL1Q6NUJ1 521 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TBC1D1Q86TI0 1168 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 PIANPQ8IYJ0 282 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 FSTL5Q8N475 847 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 PPP1R14CQ8TAE6 165 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 ZNF398Q8TD17 642 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 CCT6BQ92526 530 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 UBXN10Q96LJ8 280 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 AARSD1Q9BTE6 412 aaKnown RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 C20orf27Q9GZN8 174 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 ZNF395Q9H8N7 513 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 NPHS2Q9NP85 383 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 THAP1Q9NVV9 213 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 KIAA1549LQ6ZVL6 1849 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 C1orf232A0A0U1RR37 186 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 OTOL1A6NHN0 477 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TTC34A8MYJ7 566 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TK2O00142 265 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 SRPRAP08240 638 aaKnown RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 DLDP09622 509 aaKnown RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 GRK2P25098 689 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 NNMTP40261 264 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 SUOXP51687 545 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 PDGFRLQ15198 375 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 PTPRNQ16849 979 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 ZYG11AQ6WRX3 759 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TRPM8Q7Z2W7 1104 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 HEXDCQ8WVB3 486 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 SCRN2Q96FV2 425 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 SCYL1Q96KG9 808 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 RMDN2Q96LZ7 410 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 TRIM55Q9BYV6 548 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 CIPCQ9C0C6 399 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 GPAMQ9HCL2 828 aa19.79■□□□□ 0.76
COPS7A-218ENST00000543939 THG1LQ9NWX6 298 aaKnown RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 CPSF2Q9P2I0 782 aaKnown RBP19.79■□□□□ 0.76
COPS7A-218ENST00000543939 COL4A3Q01955 1670 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 A0A1W2PQ67 120 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 NDUFS3O75489 264 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 KIAA0754O94854 1291 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 CLDN7O95471 211 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 UGT2B4P06133 528 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 ATP5BP06576 529 aaKnown RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 RALBP11234 206 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 SP100P23497 879 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 SLC26A3P40879 764 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 RECQLP46063 649 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 GLRBP48167 497 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 TTPAP49638 278 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 KPNA2P52292 529 aaKnown RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 ZRANB3Q5FWF4 1079 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 RNF187Q5TA31 235 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 TDHQ8IZJ6 230 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 SPATA6LQ8N4H0 392 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 ST13P5Q8NFI4 369 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms