RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, human

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP140-213	ENST00000543928	CFI	P05156	583 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	PCCB	P05166	539 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	IVD	P26440	423 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	CD38	P28907	300 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	IGFALS	P35858	605 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	HMGCL	P35914	325 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	SPINT3	P49223	89 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	CSNK1E	P49674	416 aa	Known RBP	13.6	□□□□□ -0.23
SP140-213	ENST00000543928	AFF3	P51826	1226 aa	Known RBP	13.6	□□□□□ -0.23
SP140-213	ENST00000543928	POU6F1	Q14863	301 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	TEAD4	Q15561	434 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	TAF1A	Q15573	450 aa	Predicted RBP	13.6	□□□□□ -0.23
SP140-213	ENST00000543928	DUOXA1	Q1HG43	343 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	IZUMO3	Q5VZ72	239 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	LAYN	Q6UX15	382 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	KDM7A	Q6ZMT4	941 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	ZNF534	Q76KX8	674 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	RABEPK	Q7Z6M1	372 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	PPIL6	Q8IXY8	311 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	RAVER1	Q8IY67	606 aa	Known RBP	13.6	□□□□□ -0.23
SP140-213	ENST00000543928	NRSN1	Q8IZ57	195 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	CEP112	Q8N8E3	955 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	NAT8L	Q8N9F0	302 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	CEP76	Q8TAP6	659 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	BRSK1	Q8TDC3	778 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	BMF	Q96LC9	184 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	TRIM31	Q9BZY9	425 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	ABCG8	Q9H221	673 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	BPIFA1	Q9NP55	256 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SP140-213	ENST00000543928	ARL5A	Q9Y689	179 aa		13.6	□□□□□ -0.23
SP140-213	ENST00000543928	KNL1	Q8NG31	2342 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RALGAPA1	Q6GYQ0	2036 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	EP300	Q09472	2414 aa	Predicted RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928		A0A1W2PR77	199 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RGSL1	A5PLK6	1076 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	POM121B	A6NF01	834 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	C2orf81	A6NN90	581 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928		A6NNZ2	444 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	GOLGA8M	H3BSY2	632 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	BUD23	O43709	281 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	CRTAM	O95727	393 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	WNT1	P04628	370 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	BPI	P17213	487 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	LPO	P22079	712 aa	Predicted RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SESN2	P58004	480 aa	Predicted RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SARNP	P82979	210 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SPEM2	Q0P670	501 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SEPT6	Q14141	434 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PTPRCAP	Q14761	206 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	TRIM61	Q5EBN2	209 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PLA2G2C	Q5R387	149 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	CERCAM	Q5T4B2	595 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ESRP1	Q6NXG1	681 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	C8orf74	Q6P047	294 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	LRRC8B	Q6P9F7	803 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SLC23A3	Q6PIS1	610 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	KYAT3	Q6YP21	454 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ZNF765	Q7L2R6	523 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ASCL5	Q7RTU5	278 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ABI3BP	Q7Z7G0	1075 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PCGF5	Q86SE9	256 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PELI3	Q8N2H9	469 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	MFSD2A	Q8NA29	543 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PLA2G15	Q8NCC3	412 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	GPR26	Q8NDV2	337 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	MCU	Q8NE86	351 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RUBCN	Q92622	972 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SCAMP4	Q969E2	229 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	AP2M1	Q96CW1	435 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SNF8	Q96H20	258 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	HINFP	Q9BQA5	517 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	ERP44	Q9BS26	406 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RIOK2	Q9BVS4	552 aa	Known RBP	13.59	□□□□□ -0.23
SP140-213	ENST00000543928	CARD6	Q9BX69	1037 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	FAM83D	Q9H4H8	585 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	RAD18	Q9NS91	495 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	IL17C	Q9P0M4	197 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	SNX24	Q9Y343	169 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	PKP3	Q9Y446	797 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	KCTD3	Q9Y597	815 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	CACNA1E	Q15878	2313 aa		13.59	□□□□□ -0.23
SP140-213	ENST00000543928	MYLK	Q15746	1914 aa		13.58	□□□□□ -0.23
SP140-213	ENST00000543928		A0A1B0GVT2	93 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928		K7ESM1	405 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	AP3B1	O00203	1094 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	STX7	O15400	261 aa	Known RBP	13.58	□□□□□ -0.24
SP140-213	ENST00000543928	LDB2	O43679	373 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	THEGL	P0DJG4	465 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	RPL21	P46778	160 aa	Known RBP	13.58	□□□□□ -0.24
SP140-213	ENST00000543928	C21orf59	P57076	290 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	DPT	Q07507	201 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	MTM1	Q13496	603 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	INPP5A	Q14642	412 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	CCDC38	Q502W7	563 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	ALS2CL	Q60I27	953 aa		13.58	□□□□□ -0.24
SP140-213	ENST00000543928	RAET1G	Q6H3X3	334 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms