RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDCD2-208ENST00000541970 HDAC10Q969S8 669 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 VPS39Q96JC1 886 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 SLC45A3Q96JT2 553 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 PARVBQ9HBI1 364 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
PDCD2-208ENST00000541970 CHRAC1Q9NRG0 131 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 VPS28Q9UK41 221 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 ERVK-11Q9UQG0 969 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 TRAF6Q9Y4K3 522 aa16.75■□□□□ 0.27
PDCD2-208ENST00000541970 ZNF701M0R085 212 aaPredicted RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 OXTRP30559 389 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ACADSBP45954 432 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 STX1BP61266 288 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 PHF21BQ96EK2 531 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 RNF38Q9H0F5 515 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ITM2CQ9NQX7 267 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 DDX28Q9NUL7 540 aaKnown RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 MIOSQ9NXC5 875 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 SNRPB2P08579 225 aaKnown RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 PCNAP12004 261 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TPSB2P20231 275 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TNK2Q07912 1038 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 GRM3Q14832 879 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TPSAB1Q15661 275 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 UNC93AQ86WB7 457 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 SLC41A1Q8IVJ1 513 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 PNPLA1Q8N8W4 532 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ZFP90Q8TF47 636 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 IL12RB2Q99665 862 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ZNF670Q9BS34 389 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ARHGAP39Q9C0H5 1083 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 FAM105AQ9NUU6 356 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 PTBP2Q9UKA9 531 aaKnown RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 A0A1W2PQ67 120 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TAF4O00268 1085 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 F2P00734 622 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 ELNP15502 786 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 CHRM3P20309 590 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 YWHAQP27348 245 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 CREB5Q02930 508 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 NCBP2-AS2Q69YL0 99 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 CYP4V2Q6ZWL3 525 aaPredicted RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 SLC26A9Q7LBE3 791 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TFAP2DQ7Z6R9 452 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 CMTR2Q8IYT2 770 aaKnown RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 PSD4Q8NDX1 1056 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 CALML6Q8TD86 181 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 MTMR10Q9NXD2 777 aa16.74■□□□□ 0.27
PDCD2-208ENST00000541970 TRIP12Q14669 1992 aaPredicted RBP16.74■□□□□ 0.27
PDCD2-208ENST00000541970 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 H0YJX3 145 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 NRP2O60462 931 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 DDHD2O94830 711 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MFN2O95140 757 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 LIMK2P53671 638 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 TRIM32Q13049 653 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 OXA1LQ15070 435 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 INAVAQ3KP66 663 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 ARL13BQ3SXY8 428 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 FAM117BQ6P1L5 589 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 FSTL5Q8N475 847 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 ARNTL2Q8WYA1 636 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 SH3YL1Q96HL8 342 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MUS81Q96NY9 551 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 DUSP16Q9BY84 665 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 SMPD3Q9NY59 655 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 BFARQ9NZS9 450 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MID2Q9UJV3 735 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 SLC30A1Q9Y6M5 507 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 EIF3FO00303 357 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 GUCY1B2O75343 617 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 NADKO95544 446 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 CAPGP40121 348 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 PNPLA4P41247 253 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 COPZ1P61923 177 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 POU6F1Q14863 301 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MAPRE2Q15555 327 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 CERCAMQ5T4B2 595 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 NEPROQ6NW34 567 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 CLEC20AQ6ZU45 233 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MIB1Q86YT6 1006 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 GTF3C2Q8WUA4 911 aaPredicted RBP16.73■□□□□ 0.27
PDCD2-208ENST00000541970 MTRRQ9UBK8 725 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 GIMAP2Q9UG22 337 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 SPO11Q9Y5K1 396 aa16.73■□□□□ 0.27
PDCD2-208ENST00000541970 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
PDCD2-208ENST00000541970 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
PDCD2-208ENST00000541970 ENO2P09104 434 aaPredicted RBP16.72■□□□□ 0.27
PDCD2-208ENST00000541970 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
PDCD2-208ENST00000541970 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
PDCD2-208ENST00000541970 DGCR6Q14129 220 aa16.72■□□□□ 0.27
PDCD2-208ENST00000541970 CLEC6AQ6EIG7 209 aa16.72■□□□□ 0.27
PDCD2-208ENST00000541970 CCDC81Q6ZN84 652 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms