RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 A0A1W2PNU3 283 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-211ENST00000539843 NVLO15381 856 aaKnown RBP15.28■□□□□ 0.04
UBE3B-211ENST00000539843 NOBOXO60393 691 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 CPNE6O95741 557 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 LIPCP11150 499 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 ZNF30P17039 623 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 CD82P27701 267 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 MAXP61244 160 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 CDK3Q00526 305 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 TRAF2Q12933 501 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 CLN3Q13286 438 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 ZNF843Q8N446 348 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 GPBAR1Q8TDU6 330 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 LGR4Q9BXB1 951 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 ETNK2Q9NVF9 386 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 AMACRQ9UHK6 382 aa15.28■□□□□ 0.04
UBE3B-211ENST00000539843 LUC7L2Q9Y383 392 aaKnown RBP15.28■□□□□ 0.04
UBE3B-211ENST00000539843 TTC24A2A3L6 582 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 KRT7P08729 469 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 MX2P20592 715 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 ALDH4A1P30038 563 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 GJC1P36383 396 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 FANCCQ00597 558 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 AMZ1Q400G9 498 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 DOK6Q6PKX4 331 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 SLC30A9Q6PML9 568 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 USP53Q70EK8 1073 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 TP53INP2Q8IXH6 220 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 KCTD6Q8NC69 237 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 ZNF564Q8TBZ8 553 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 MCCC1Q96RQ3 725 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 SEMA3CQ99985 751 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 DPYSL5Q9BPU6 564 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.04
UBE3B-211ENST00000539843 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 SUFUQ9UMX1 484 aa15.27■□□□□ 0.04
UBE3B-211ENST00000539843 SHROOM3Q8TF72 1996 aa15.27■□□□□ 0.03
UBE3B-211ENST00000539843 NPIPB15A6NHN6 443 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 HGSO14964 777 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 C1QL1O75973 258 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 PEX11BO96011 259 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CYP1A2P05177 515 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 IVLP07476 585 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 HGFP14210 728 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CTPS1P17812 591 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 GM2AP17900 193 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 ACTR1BP42025 376 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 GPR3P46089 330 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 MAPK10P53779 464 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 ACTR1AP61163 376 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 SLC25A11Q02978 314 aaKnown RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 DPTQ07507 201 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 PDK2Q15119 407 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 MANEAQ5SRI9 462 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 Q6ZVL8 140 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 HSD11B1LQ7Z5J1 315 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 GALNT13Q8IUC8 556 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 RAVER1Q8IY67 606 aaKnown RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 PGBD5Q8N414 524 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CCL4L1Q8NHW4 92 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CPLX3Q8WVH0 158 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CTNNBL1Q8WYA6 563 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 OR2M4Q96R27 311 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 FRMD8Q9BZ67 464 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-211ENST00000539843 CTTNBP2NLQ9P2B4 639 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 SLC17A4Q9Y2C5 497 aa15.26■□□□□ 0.03
UBE3B-211ENST00000539843 RP1P56715 2156 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 PMS2P1A4D2B8 440 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 CEACAM5P06731 702 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 TCF4P15884 667 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 LHCGRP22888 699 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 ZFP36L1Q07352 338 aaKnown RBP15.25■□□□□ 0.03
UBE3B-211ENST00000539843 TRA2AQ13595 282 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBE3B-211ENST00000539843 LRP8Q14114 963 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 IQCB1Q15051 598 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 ODF2Q5BJF6 829 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 HGSNATQ68CP4 663 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 LRRC66Q68CR7 880 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 KCTD16Q68DU8 428 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 XKR5Q6UX68 686 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 ADAMTSL4Q6UY14 1074 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 NYAP1Q6ZVC0 841 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 ZNF765Q7L2R6 523 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 NRSN1Q8IZ57 195 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 MED8Q96G25 268 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 AHCYL2Q96HN2 611 aaKnown RBP15.25■□□□□ 0.03
UBE3B-211ENST00000539843 BTBD6Q96KE9 485 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 B3GNT4Q9C0J1 378 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 DEF6Q9H4E7 631 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 RBM22Q9NW64 420 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBE3B-211ENST00000539843 UVRAGQ9P2Y5 699 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 CAPN11Q9UMQ6 739 aa15.25■□□□□ 0.03
UBE3B-211ENST00000539843 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms