RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TTC30BQ8N4P2 665 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 PTCD2Q8WV60 388 aaKnown RBP15.42■□□□□ 0.06
DDB1-216ENST00000539739 FOXJ1Q92949 421 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 C1QTNF7Q9BXJ2 289 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 SLC17A9Q9BYT1 436 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 ARGLU1Q9NWB6 273 aaPredicted RBP15.42■□□□□ 0.06
DDB1-216ENST00000539739 ZFR2Q9UPR6 939 aaKnown RBP15.42■□□□□ 0.06
DDB1-216ENST00000539739 RGSL1A5PLK6 1076 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 WNT9AO14904 365 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 H2AFXP16104 143 aaPredicted RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 MAT2AP31153 395 aaKnown RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 NUDT1P36639 197 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 CARSP49589 748 aaKnown RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 PPP2CBP62714 309 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 PPP2CAP67775 309 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 SKIDA1Q1XH10 827 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 TMEM259Q4ZIN3 620 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 CCDC38Q502W7 563 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 SETMARQ53H47 684 aaPredicted RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 SPDYCQ5MJ68 293 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 FNBP1LQ5T0N5 605 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 ZDHHC20Q5W0Z9 365 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 CEP128Q6ZU80 1094 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 CEP68Q76N32 757 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 HSD11B1LQ7Z5J1 315 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 CBARPQ8N350 705 aaPredicted RBP15.41■□□□□ 0.06
DDB1-216ENST00000539739 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 STYXQ8WUJ0 223 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 LRRC39Q96DD0 335 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 SYBUQ9NX95 663 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 COQ6Q9Y2Z9 468 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 TCAF1Q9Y4C2 921 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 MAD1L1Q9Y6D9 718 aa15.41■□□□□ 0.06
DDB1-216ENST00000539739 METTL12A8MUP2 240 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 EIF3HO15372 352 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDB1-216ENST00000539739 LDB2O43679 373 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 RECQL5O94762 991 aaPredicted RBP15.4■□□□□ 0.06
DDB1-216ENST00000539739 PAK4O96013 591 aaPredicted RBP15.4■□□□□ 0.06
DDB1-216ENST00000539739 C1SP09871 688 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 BCKDHBP21953 392 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 HADHAP40939 763 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 SPINT3P49223 89 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 CRADDP78560 199 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 ZNF284Q2VY69 593 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
DDB1-216ENST00000539739 NRSN1Q8IZ57 195 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 OR4K2Q8NGD2 314 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 ASB12Q8WXK4 309 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 SNX19Q92543 992 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 SIGLEC10Q96LC7 697 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 COQ10AQ96MF6 247 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 PWWP2AQ96N64 755 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 FMO2Q99518 471 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 C19orf43Q9BQ61 176 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 NAT9Q9BTE0 207 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 C1QTNF2Q9BXJ5 285 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 PHACTR1Q9C0D0 580 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 CDH19Q9H159 772 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 DUSP15Q9H1R2 295 aaPredicted RBP15.4■□□□□ 0.06
DDB1-216ENST00000539739 MRM3Q9HC36 420 aaKnown RBP15.4■□□□□ 0.06
DDB1-216ENST00000539739 ZDHHC18Q9NUE0 388 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 IL17CQ9P0M4 197 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDB1-216ENST00000539739 RIMKLBQ9ULI2 386 aa15.4■□□□□ 0.06
DDB1-216ENST00000539739 ZNF318Q5VUA4 2279 aa15.39■□□□□ 0.06
DDB1-216ENST00000539739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 MROH6A6NGR9 719 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 MEI4A8MW99 385 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 LATO43561 262 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 HRO43593 1189 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 BUD23O43709 281 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 ETV3P41162 512 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 CREB5Q02930 508 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 PDIA2Q13087 525 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 SRSF5Q13243 272 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 AGERQ15109 404 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 ELF2Q15723 593 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 TSTD2Q5T7W7 516 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 Q6ZVL8 140 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 CYP2U1Q7Z449 544 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 TECPR1Q7Z6L1 1165 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 CCDC25Q86WR0 208 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 CCNJLQ8IV13 435 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 TMEFF1Q8IYR6 380 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 GPR161Q8N6U8 529 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 EIF1ADQ8N9N8 165 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 KLK6Q92876 244 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 PEX13Q92968 403 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 BIRC7Q96CA5 298 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 EID2BQ96D98 161 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 NUS1Q96E22 293 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 STAMBPL1Q96FJ0 436 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 DTD2Q96FN9 168 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 PAIP2Q9BPZ3 127 aaKnown RBP15.39■□□□□ 0.05
DDB1-216ENST00000539739 KIFC1Q9BW19 673 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 ANKZF1Q9H8Y5 726 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 BPIFA1Q9NP55 256 aa15.39■□□□□ 0.05
DDB1-216ENST00000539739 CHRAC1Q9NRG0 131 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms