RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PPM1JQ5JR12 505 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 ASTLQ6HA08 431 aaPredicted RBP17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 KIAA0930Q6ICG6 404 aaPredicted RBP17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 IRF7Q92985 503 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 RMDN1Q96DB5 314 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 LRRC3BQ96PB8 259 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 TDRD1Q9BXT4 1180 aaKnown RBP17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 TM6SF2Q9BZW4 377 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 GPAMQ9HCL2 828 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 WNT6Q9Y6F9 365 aa17.11■□□□□ 0.33
PCDHB17P-201ENST00000539533 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 SOBPA7XYQ1 873 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 AHSGP02765 367 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 LYNP07948 512 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 PAMP19021 973 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CRHR1P34998 444 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 ARSDP51689 593 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 MPP1Q00013 466 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 PDE1CQ14123 709 aaPredicted RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 UBAP2LQ14157 1087 aaKnown RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 NCEH1Q6PIU2 408 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CMC1Q7Z7K0 106 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 ACDQ96AP0 544 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 ABHD8Q96I13 439 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 RPL10LQ96L21 214 aaKnown RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 FAM210AQ96ND0 272 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 TTC1Q99614 292 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 BBS2Q9BXC9 721 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 C1orf21Q9H246 121 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 PPM1HQ9ULR3 514 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 XIRP2A4UGR9 3374 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 BIRC5O15392 142 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 BAG2O95816 211 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CES1P23141 567 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CTSOP43234 321 aaPredicted RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 TRAF2Q12933 501 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 STX3Q13277 289 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 SLC14A2Q15849 920 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 LRRC23Q53EV4 343 aaPredicted RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CNTN4Q8IWV2 1026 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 ADGRG2Q8IZP9 1017 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 EBF4Q9BQW3 602 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 FAM192AQ9GZU8 254 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CAB39LQ9H9S4 337 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 SPO11Q9Y5K1 396 aa17.1■□□□□ 0.33
PCDHB17P-201ENST00000539533 MYO9BQ13459 2157 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 AURKAO14965 403 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 PAPSS2O95340 614 aaPredicted RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 POU2F2P09086 479 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 CRABP2P29373 138 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 TYK2P29597 1187 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 GSTT1P30711 240 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 SLC1A2P43004 574 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 CSE1LP55060 971 aaKnown RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 USP4Q13107 963 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 KCNC3Q14003 757 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 LY6G5CQ5SRR4 150 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 NEPROQ6NW34 567 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ZCCHC23Q6ZST2 131 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 LPCAT1Q8NF37 534 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 BRSK1Q8TDC3 778 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 HDAC10Q969S8 669 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 VPS39Q96JC1 886 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 SLC28A3Q9HAS3 691 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 SNX15Q9NRS6 342 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 MSRAQ9UJ68 235 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ANKRD36A6QL64 1941 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 AOC1P19801 751 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 STK19P49842 368 aaPredicted RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 PGGT1BP53609 377 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 CDC16Q13042 620 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 GRM3Q14832 879 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 PTPRRQ15256 657 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 DLG2Q15700 870 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 PITRM1Q5JRX3 1037 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ZC3HC1Q86WB0 502 aaKnown RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 THAP1Q9NVV9 213 aa17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 ARIH1Q9Y4X5 557 aaPredicted RBP17.09■□□□□ 0.33
PCDHB17P-201ENST00000539533 MEI4A8MW99 385 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 ZCCHC18P0CG32 403 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 TYRP14679 529 aa17.08■□□□□ 0.33
PCDHB17P-201ENST00000539533 CPOXP36551 454 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms