RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 C6orf106Q9H6K1 298 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 ZC3H7BQ9UGR2 993 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 CD84Q9UIB8 345 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 FNDC3AQ9Y2H6 1198 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 PKP3Q9Y446 797 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 FAM237BA0A1B0GVD1 139 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 MAGEA4P43358 317 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 RPS21P63220 83 aaKnown RBP23.47■■□□□ 1.35
TMEM260-202ENST00000538838 PDE1BQ01064 536 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 ESRP1Q6NXG1 681 aaKnown RBP23.47■■□□□ 1.35
TMEM260-202ENST00000538838 Q6ZVL8 140 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 HORMAD1Q86X24 394 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 OR13J1Q8NGT2 312 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 PYROXD1Q8WU10 500 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 STYXQ8WUJ0 223 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 KLK6Q92876 244 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 TSPYL1Q9H0U9 437 aa23.47■■□□□ 1.35
TMEM260-202ENST00000538838 LZTS3O60299 673 aaPredicted RBP23.46■■□□□ 1.35
TMEM260-202ENST00000538838 BPIP17213 487 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 BCKDHBP21953 392 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 MAT2AP31153 395 aaKnown RBP23.46■■□□□ 1.35
TMEM260-202ENST00000538838 SPINT3P49223 89 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 ANGPT1Q15389 498 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 NEK5Q6P3R8 708 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 CEP128Q6ZU80 1094 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 NLRP9Q7RTR0 991 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 LONP2Q86WA8 852 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM260-202ENST00000538838 PLAC1Q9HBJ0 212 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 TREX1Q9NSU2 369 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 NLE1Q9NVX2 485 aaPredicted RBP23.46■■□□□ 1.35
TMEM260-202ENST00000538838 PKD2L2Q9NZM6 624 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 FKBPLQ9UIM3 349 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 RPS6KL1Q9Y6S9 549 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 ZNF318Q5VUA4 2279 aa23.46■■□□□ 1.35
TMEM260-202ENST00000538838 MAGEB16A2A368 324 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 TM7SF2O76062 418 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 RECQL5O94762 991 aaPredicted RBP23.45■■□□□ 1.34
TMEM260-202ENST00000538838 ARSDP51689 593 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 FGL2Q14314 439 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 SMAD1Q15797 465 aaKnown RBP23.45■■□□□ 1.34
TMEM260-202ENST00000538838 ZNF284Q2VY69 593 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 ANKRD20A4Q4UJ75 823 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 UBAP2Q5T6F2 1119 aaKnown RBP23.45■■□□□ 1.34
TMEM260-202ENST00000538838 ARMC3Q5W041 872 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 ALS2CLQ60I27 953 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 CAPN12Q6ZSI9 719 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 TECPR1Q7Z6L1 1165 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 TMEM135Q86UB9 458 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 TRIM69Q86WT6 500 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 GPR26Q8NDV2 337 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 DTD2Q96FN9 168 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 FCRL3Q96P31 734 aaPredicted RBP23.45■■□□□ 1.34
TMEM260-202ENST00000538838 NAT9Q9BTE0 207 aa23.45■■□□□ 1.34
TMEM260-202ENST00000538838 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.45■■□□□ 1.34
TMEM260-202ENST00000538838 C10orf142B7Z368 130 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 WNT9AO14904 365 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 NDUFS2O75306 463 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 USP1O94782 785 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 POLBP06746 335 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 TUBBP07437 444 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 ACVR1Q04771 509 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 CRYMQ14894 314 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 SKIDA1Q1XH10 827 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 UNC5AQ6ZN44 842 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 AENQ8WTP8 325 aaKnown RBP23.44■■□□□ 1.34
TMEM260-202ENST00000538838 NUS1Q96E22 293 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 CDC42EP4Q9H3Q1 356 aaKnown RBP23.44■■□□□ 1.34
TMEM260-202ENST00000538838 RIMKLBQ9ULI2 386 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 CUL9Q8IWT3 2517 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 PLXNB3Q9ULL4 1909 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 ZCWPW2A0A1B0GU75 182 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 FSBPO95073 299 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 SRSF5Q13243 272 aaKnown RBP23.44■■□□□ 1.34
TMEM260-202ENST00000538838 KIAA0895LQ68EN5 471 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 RELL1Q8IUW5 271 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 CCNJLQ8IV13 435 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 PEX13Q92968 403 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 TBATAQ96M53 351 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 C1QTNF2Q9BXJ5 285 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 SUDS3Q9H7L9 328 aaPredicted RBP23.44■■□□□ 1.34
TMEM260-202ENST00000538838 NINJ2Q9NZG7 142 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 IL1RAPL1Q9NZN1 696 aa23.44■■□□□ 1.34
TMEM260-202ENST00000538838 THADAQ6YHU6 1953 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 RPP40O75818 363 aaKnown RBP23.43■■□□□ 1.34
TMEM260-202ENST00000538838 IGHV4-34P06331 123 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 PSMA3P25788 255 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 SPAM1P38567 509 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 RPL6Q02878 288 aaKnown RBP23.43■■□□□ 1.34
TMEM260-202ENST00000538838 CREB5Q02930 508 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 SLMAPQ14BN4 828 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 STEAP4Q687X5 459 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 FAM151BQ6UXP7 276 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 CYP2U1Q7Z449 544 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 DEFB119Q8N690 84 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 SCAMP4Q969E2 229 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 HDAC10Q969S8 669 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 SLC17A9Q9BYT1 436 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 TXLNGYQ9BZA5 131 aa23.43■■□□□ 1.34
TMEM260-202ENST00000538838 GAPDHSO14556 408 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms